Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G60500
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G60500
Arabidopsis thaliana
2.9e-247
855.5
439
100.0
AT3G12990
Arabidopsis thaliana
2.4e-161
570.1
307
91.9
Pp3c15_10030
Physcomitrella patens
3.2e-105
383.6
395
50.9
Cre03.g175000
Chlamydomonas reinhardtii
1.3e-74
282.0
297
45.1
SPCC757.08
Schizosaccharomyces pombe
1.2e-64
248.8
267
44.2
ENSG00000123737
Homo sapiens
7.4e-62
239.6
315
41.0
Naga_100075g8
Nannochloropsis gaditana
6.7e-55
216.5
337
37.4
YDR280W
Saccharomyces cerevisiae strain S288C
5.7e-54
213.4
288
39.6
gsu91140
Galdieria sulphuraria
9.7e-54
212.6
351
34.5
WBGene00018154
Caenorhabditis elegans
1.8e-47
191.8
274
36.1
ccr156060
Chondrus crispus
1.2e-46
189.1
317
33.1
emh46820
Emiliania huxleyi
6.3e-45
183.3
215
42.8
FBgn0030789
Drosophila melanogaster
1.6e-40
168.7
261
33.7
pte238780
Paramecium tetraurelia
4.9e-37
157.1
262
33.6
Ec-17_001830
Ectocarpus siliculosus
3.5e-35
151.0
158
46.2
sya00G106860
Synedra acus
3.8e-34
147.5
332
31.6
ENSG00000120699
Homo sapiens
8.0e-32
139.8
271
29.9
Pp3c22_2380
Physcomitrella patens
5.8e-30
133.7
273
34.1
ps00G51530
Pseudo-nitzschia multiseries
1.9e-28
128.6
264
31.1
Naga_100704g1
Nannochloropsis gaditana
1.6e-27
125.6
248
35.1
gene17093
Fragilariopsis cylindrus
1.3e-26
122.5
283
29.7
Sro1649_g288620
Seminavis robusta
1.7e-26
122.1
295
29.2
Ec-04_006390
Ectocarpus siliculosus
3.9e-26
120.9
270
27.4
ccr187460
Chondrus crispus
6.6e-26
120.2
279
29.4
tho44160
Thalassiosira oceanica
1.1e-25
119.4
484
24.8
Pp3c19_14820
Physcomitrella patens
1.5e-25
119.0
283
27.9
AT1G60080
Arabidopsis thaliana
1.9e-25
118.6
275
28.7
AT3G07750
Arabidopsis thaliana
3.3e-25
117.9
279
28.7
ptri12870
Phaeodactylum tricornutum
4.3e-25
117.5
310
28.4
ENSG00000075914
Homo sapiens
5.6e-25
117.1
254
30.7
CC00G79650
Cyclotella cryptica
9.5e-25
116.3
335
26.3
PSNMU-V1.4_AUG-EV-PASAV3_0074370
Pseudo-nitzschia multistriata
2.1e-24
115.2
397
26.2
tps113710
Thalassiosira pseudonana
1.8e-23
112.1
458
25.8
gsu124860
Galdieria sulphuraria
2.0e-22
108.6
243
29.2
fso61330
Fistulifera solaris
1.3e-21
105.9
269
29.4
fso132130
Fistulifera solaris
1.3e-21
105.9
268
29.1
ccr173640
Chondrus crispus
3.7e-21
104.4
273
27.1
SPBC17D1.03c
Schizosaccharomyces pombe
1.9e-20
102.1
256
25.0
pte511660
Paramecium tetraurelia
3.2e-20
101.3
209
31.1
CM17G00350
Cyanidioschyzon merolae
2.1e-19
98.6
234
30.3
FBgn0034065
Drosophila melanogaster
6.6e-18
93.6
258
26.7
tps30990
Thalassiosira pseudonana
1.2e-16
89.4
342
24.9
Ec-26_004200
Ectocarpus siliculosus
6.2e-16
87.0
170
30.0
ps00G53350
Pseudo-nitzschia multiseries
1.4e-15
85.9
261
26.4
Naga_100022g50
Nannochloropsis gaditana
2.3e-15
85.1
225
27.6
tps211600
Thalassiosira pseudonana
1.2e-14
82.8
308
25.0
Cre03.g188200
Chlamydomonas reinhardtii
2.6e-14
81.6
249
26.1
Cre10.g440900
Chlamydomonas reinhardtii
2.2e-13
78.6
298
23.8
emh680110
Emiliania huxleyi
9.2e-12
73.2
258
25.6
emh258550
Emiliania huxleyi
9.2e-12
73.2
258
25.6
sya00G70190
Synedra acus
7.8e-11
70.1
225
25.3
gsu98190
Galdieria sulphuraria
3.0e-10
68.2
273
21.6
CC00G98300
Cyclotella cryptica
8.6e-10
66.6
165
29.7
WBGene00009289
Caenorhabditis elegans
6.2e-08
60.5
181
27.1
ptri12650
Phaeodactylum tricornutum
1.2e-06
56.2
348
22.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing