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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G57510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G57510
Arabidopsis thaliana
1.9e-211
736.5
432
100.0
AT2G41850
Arabidopsis thaliana
1.3e-135
484.6
435
59.8
AT3G07970
Arabidopsis thaliana
3.0e-79
297.4
372
42.5
AT1G23460
Arabidopsis thaliana
1.9e-65
251.5
404
38.1
AT1G80170
Arabidopsis thaliana
1.7e-63
245.0
428
37.4
AT1G70500
Arabidopsis thaliana
3.9e-63
243.8
407
36.4
AT3G15720
Arabidopsis thaliana
2.1e-56
221.5
373
35.9
AT1G02460
Arabidopsis thaliana
2.5e-54
214.5
283
42.8
AT1G56710
Arabidopsis thaliana
3.3e-54
214.2
291
42.6
AT4G35670
Arabidopsis thaliana
1.3e-53
212.2
344
37.2
AT5G14650
Arabidopsis thaliana
2.1e-53
211.5
355
35.8
AT2G43890
Arabidopsis thaliana
2.8e-53
211.1
370
35.1
AT2G43870
Arabidopsis thaliana
4.8e-53
210.3
377
34.2
AT3G59850
Arabidopsis thaliana
3.1e-52
207.6
372
34.9
Pp3c15_15300
Physcomitrella patens
4.5e-51
203.8
340
35.3
AT5G17200
Arabidopsis thaliana
3.8e-50
200.7
381
34.1
AT1G48100
Arabidopsis thaliana
6.4e-50
199.9
279
39.8
Pp3c18_2210
Physcomitrella patens
1.9e-49
198.4
278
39.9
AT2G43860
Arabidopsis thaliana
3.2e-49
197.6
380
34.2
AT5G27530
Arabidopsis thaliana
7.1e-49
196.4
273
39.9
AT1G02790
Arabidopsis thaliana
1.2e-48
195.7
380
34.2
AT2G43880
Arabidopsis thaliana
7.9e-48
193.0
367
31.3
AT5G44840
Arabidopsis thaliana
2.3e-47
191.4
343
32.4
AT3G26610
Arabidopsis thaliana
1.5e-46
188.7
441
30.4
Pp3c23_3890
Physcomitrella patens
1.9e-46
188.3
428
32.0
AT1G65570
Arabidopsis thaliana
3.3e-46
187.6
386
32.9
AT1G43080
Arabidopsis thaliana
1.3e-45
185.7
391
31.5
AT1G43090
Arabidopsis thaliana
1.3e-45
185.7
386
31.9
AT2G15460
Arabidopsis thaliana
2.8e-45
184.5
389
31.6
AT1G05650
Arabidopsis thaliana
3.7e-45
184.1
385
31.9
AT3G07850
Arabidopsis thaliana
3.7e-45
184.1
354
33.9
AT1G60590
Arabidopsis thaliana
4.8e-45
183.7
305
36.1
AT1G78400
Arabidopsis thaliana
6.2e-45
183.3
369
33.6
AT1G05660
Arabidopsis thaliana
1.1e-44
182.6
385
31.7
AT1G10640
Arabidopsis thaliana
1.1e-44
182.6
370
31.9
AT2G15450
Arabidopsis thaliana
1.4e-44
182.2
388
31.4
AT2G26620
Arabidopsis thaliana
1.8e-44
181.8
390
31.3
AT4G18180
Arabidopsis thaliana
1.8e-44
181.8
386
32.1
AT1G43100
Arabidopsis thaliana
4.0e-44
180.6
386
31.6
AT2G40310
Arabidopsis thaliana
6.9e-44
179.9
391
31.7
AT3G07820
Arabidopsis thaliana
9.0e-44
179.5
362
32.6
AT4G13760
Arabidopsis thaliana
1.2e-43
179.1
391
30.7
AT2G15470
Arabidopsis thaliana
2.0e-43
178.3
389
31.1
AT1G17150
Arabidopsis thaliana
2.6e-43
177.9
389
30.8
AT4G01890
Arabidopsis thaliana
5.8e-43
176.8
283
36.4
AT5G39910
Arabidopsis thaliana
9.9e-43
176.0
386
31.9
AT3G14040
Arabidopsis thaliana
1.3e-42
175.6
349
33.2
AT4G32370
Arabidopsis thaliana
2.2e-42
174.9
265
39.2
AT2G33160
Arabidopsis thaliana
1.1e-41
172.6
386
31.6
AT5G48140
Arabidopsis thaliana
1.4e-41
172.2
362
32.3
AT1G80140
Arabidopsis thaliana
3.5e-40
167.5
337
32.6
AT3G07840
Arabidopsis thaliana
3.5e-40
167.5
370
31.1
AT4G32375
Arabidopsis thaliana
7.9e-40
166.4
351
33.3
AT3G07830
Arabidopsis thaliana
1.8e-39
165.2
359
31.5
AT5G44830
Arabidopsis thaliana
1.1e-38
162.5
318
30.2
AT4G32380
Arabidopsis thaliana
4.2e-33
144.1
281
31.7
AA0005G00450
Aureococcus anophagefferens
9.4e-25
116.3
289
27.0
YJR153W
Saccharomyces cerevisiae strain S288C
1.6e-16
89.0
209
30.6
AT2G23900
Arabidopsis thaliana
7.9e-16
86.7
297
26.9
AT3G48950
Arabidopsis thaliana
1.0e-15
86.3
317
27.1
emh733530
Emiliania huxleyi
1.8e-15
85.5
396
23.7
AT3G61490
Arabidopsis thaliana
3.7e-13
77.8
296
28.0
AT3G62110
Arabidopsis thaliana
6.3e-13
77.0
300
26.3
AT4G23820
Arabidopsis thaliana
6.3e-13
77.0
301
27.6
AA0006G05330
Aureococcus anophagefferens
1.8e-12
75.5
304
26.3
AT5G41870
Arabidopsis thaliana
1.2e-11
72.8
297
25.6
AT4G33440
Arabidopsis thaliana
1.5e-11
72.4
307
26.1
AA0010G01810
Aureococcus anophagefferens
3.4e-11
71.2
276
27.5
AT3G42950
Arabidopsis thaliana
1.0e-10
69.7
333
26.4
AT5G49215
Arabidopsis thaliana
2.2e-10
68.6
297
25.3
Pp3c6_7160
Physcomitrella patens
2.9e-10
68.2
304
28.6
Pp3c24_2470
Physcomitrella patens
3.8e-10
67.8
301
24.9
AT4G23500
Arabidopsis thaliana
6.5e-10
67.0
304
24.7
Pp3c23_13240
Physcomitrella patens
2.5e-09
65.1
379
24.5
ptri107340
Phaeodactylum tricornutum
2.5e-09
65.1
204
26.5
AT3G16850
Arabidopsis thaliana
4.2e-09
64.3
301
23.9
Pp3c19_14240
Physcomitrella patens
4.7e-08
60.8
223
24.2
Pp3c16_7320
Physcomitrella patens
1.1e-06
56.2
302
25.8
ps00G172510
Pseudo-nitzschia multiseries
1.5e-06
55.8
222
25.7
Pp3c16_9310
Physcomitrella patens
2.6e-06
55.1
221
25.8
Pp3c5_16250
Physcomitrella patens
7.4e-06
53.5
276
24.3
AT3G06770
Arabidopsis thaliana
9.7e-06
53.1
300
23.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (65 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing