Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G52560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G52560
Arabidopsis thaliana
9.5e-95
347.4
165
100.0
AT2G36060
Arabidopsis thaliana
3.8e-75
282.3
165
82.4
Pp3c26_3910
Physcomitrella patens
3.7e-62
239.2
159
71.7
Pp3c4_23750
Physcomitrella patens
4.8e-62
238.8
159
71.7
AT1G23260
Arabidopsis thaliana
2.6e-60
233.0
159
69.2
AT1G70660
Arabidopsis thaliana
3.8e-59
229.2
159
67.9
AT1G70650
Arabidopsis thaliana
1.2e-57
224.2
154
67.5
Pp3c7_5550
Physcomitrella patens
6.7e-56
218.4
147
70.1
Cre05.g247600
Chlamydomonas reinhardtii
6.7e-48
191.8
157
57.3
ccr172480
Chondrus crispus
1.6e-41
170.6
162
51.2
gsu19970
Galdieria sulphuraria
2.7e-41
169.9
154
51.3
SPCC338.05c
Schizosaccharomyces pombe
1.4e-40
167.5
153
50.3
CM16G01790
Cyanidioschyzon merolae
3.9e-40
166.0
157
50.3
Ec-17_002730
Ectocarpus siliculosus
6.7e-40
165.2
159
47.8
ENSG00000124208
Homo sapiens
5.7e-39
162.2
157
47.1
ENSG00000244687
Homo sapiens
9.7e-39
161.4
155
47.7
FBgn0035601
Drosophila melanogaster
1.7e-38
160.6
161
44.1
pte247830
Paramecium tetraurelia
6.9e-37
155.2
154
48.1
pte143280
Paramecium tetraurelia
2.6e-36
153.3
154
47.4
Naga_100048g18
Nannochloropsis gaditana
1.0e-35
151.4
162
44.4
sya00G152750
Synedra acus
3.8e-35
149.4
159
42.8
sya00G152770
Synedra acus
3.8e-35
149.4
159
42.8
sya00G152810
Synedra acus
3.8e-35
149.4
159
42.8
YGL087C
Saccharomyces cerevisiae strain S288C
5.0e-35
149.1
154
48.7
tps162420
Thalassiosira pseudonana
5.0e-35
149.1
159
45.3
gene10878
Fragilariopsis cylindrus
1.9e-34
147.1
159
41.5
Sro2191_g318370
Seminavis robusta
3.6e-33
142.9
159
42.1
ps00G178610
Pseudo-nitzschia multiseries
4.7e-33
142.5
161
39.8
fso40380
Fistulifera solaris
6.1e-33
142.1
159
42.1
ptri139610
Phaeodactylum tricornutum
5.1e-32
139.0
159
40.9
WBGene00006730
Caenorhabditis elegans
2.6e-31
136.7
157
42.7
emh540350
Emiliania huxleyi
7.7e-28
125.2
162
40.1
CC00G109680
Cyclotella cryptica
1.4e-13
77.8
53
58.5
AA0003G04350
Aureococcus anophagefferens
3.2e-10
66.6
72
41.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing