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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G48830
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G48830
Arabidopsis thaliana
0.0e+00
1748.8
882
100.0
AT5G23690
Arabidopsis thaliana
2.7e-204
713.8
495
75.2
AT1G28090
Arabidopsis thaliana
1.1e-123
446.0
440
53.2
AT5G41690
Arabidopsis thaliana
2.1e-84
315.5
425
48.0
AT2G17580
Arabidopsis thaliana
2.7e-79
298.5
459
40.5
Pp3c14_11850
Physcomitrella patens
2.2e-73
278.9
350
41.7
AT1G45100
Arabidopsis thaliana
2.6e-58
228.8
448
38.2
AT3G10845
Arabidopsis thaliana
8.5e-49
197.2
420
37.9
AT3G48840
Arabidopsis thaliana
7.3e-24
114.4
100
59.0
ptri196550
Phaeodactylum tricornutum
6.6e-09
64.7
234
29.1
AT2G23350
Arabidopsis thaliana
1.9e-08
63.2
192
26.0
WBGene00003903
Caenorhabditis elegans
2.5e-08
62.8
302
23.8
gsu38830
Galdieria sulphuraria
5.6e-08
61.6
307
22.8
Sro559_g166370
Seminavis robusta
5.6e-08
61.6
255
25.9
SPCC645.10
Schizosaccharomyces pombe
9.5e-08
60.8
287
25.1
Pp3c1_21530
Physcomitrella patens
1.2e-07
60.5
196
28.1
AT2G36660
Arabidopsis thaliana
1.6e-07
60.1
301
20.3
FBgn0265297
Drosophila melanogaster
2.8e-07
59.3
213
24.9
Naga_101251g2
Nannochloropsis gaditana
3.6e-07
58.9
185
27.6
Pp3c14_4340
Physcomitrella patens
4.7e-07
58.5
195
27.2
Ec-06_008160
Ectocarpus siliculosus
6.2e-07
58.2
221
27.1
FBgn0037369
Drosophila melanogaster
8.1e-07
57.8
177
29.9
ENSG00000070756
Homo sapiens
1.4e-06
57.0
306
22.9
ps00G145510
Pseudo-nitzschia multiseries
1.4e-06
57.0
243
25.9
sya00G127690
Synedra acus
1.4e-06
57.0
154
29.9
AT1G49760
Arabidopsis thaliana
1.8e-06
56.6
307
21.2
WBGene00010089
Caenorhabditis elegans
1.8e-06
56.6
196
27.6
AT4G34110
Arabidopsis thaliana
2.3e-06
56.2
195
25.1
SPAC57A7.04c
Schizosaccharomyces pombe
2.3e-06
56.2
195
23.1
gene6041
Fragilariopsis cylindrus
3.1e-06
55.8
138
31.2
ENSG00000090621
Homo sapiens
3.1e-06
55.8
318
21.4
PSNMU-V1.4_AUG-EV-PASAV3_0095960
Pseudo-nitzschia multistriata
3.1e-06
55.8
138
31.2
YER165W
Saccharomyces cerevisiae strain S288C
3.1e-06
55.8
197
22.8
AT3G18610
Arabidopsis thaliana
4.0e-06
55.5
77
41.6
fso46300
Fistulifera solaris
4.0e-06
55.5
175
27.4
Pp3c10_4970
Physcomitrella patens
5.2e-06
55.1
195
26.7
ENSG00000254535
Homo sapiens
8.9e-06
54.3
178
24.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing