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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G45190
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G45190
Arabidopsis thaliana
0.0e+00
1492.2
790
100.0
AT2G28360
Arabidopsis thaliana
7.4e-262
904.8
805
62.0
AT1G07990
Arabidopsis thaliana
1.7e-261
903.7
823
61.5
AT1G30470
Arabidopsis thaliana
5.2e-207
722.6
597
61.1
Pp3c8_2730
Physcomitrella patens
1.3e-205
718.0
838
47.5
Pp3c4_5240
Physcomitrella patens
9.5e-201
701.8
850
46.8
Pp3c3_35620
Physcomitrella patens
7.8e-195
682.2
640
55.9
Pp3c12_11280
Physcomitrella patens
9.4e-148
525.8
683
44.5
Cre12.g484150
Chlamydomonas reinhardtii
1.3e-93
345.9
537
38.5
ENSG00000105063
Homo sapiens
1.7e-61
239.2
623
29.4
ENSG00000110075
Homo sapiens
1.5e-60
236.1
657
29.1
ENSG00000100239
Homo sapiens
4.5e-57
224.6
621
30.0
FBgn0035688
Drosophila melanogaster
1.4e-34
149.8
454
25.3
Naga_100019g23
Nannochloropsis gaditana
1.1e-23
113.6
172
37.2
SPCC663.01c
Schizosaccharomyces pombe
3.2e-23
112.1
382
24.1
sya00G114840
Synedra acus
1.0e-21
107.1
517
21.5
emh377550
Emiliania huxleyi
8.8e-21
104.0
512
23.4
emh367200
Emiliania huxleyi
8.8e-21
104.0
512
23.4
pte74460
Paramecium tetraurelia
2.0e-20
102.8
462
23.8
pte297140
Paramecium tetraurelia
6.3e-19
97.8
465
22.4
Ec-21_006010
Ectocarpus siliculosus
1.4e-18
96.7
171
30.4
gsu37230
Galdieria sulphuraria
1.8e-18
96.3
671
23.8
pte635130
Paramecium tetraurelia
1.0e-16
90.5
451
22.4
pte44000
Paramecium tetraurelia
1.3e-16
90.1
569
21.3
pte311640
Paramecium tetraurelia
1.6e-14
83.2
547
21.0
WBGene00008166
Caenorhabditis elegans
6.7e-13
77.8
227
27.3
pte201820
Paramecium tetraurelia
8.8e-13
77.4
440
22.5
fso12720
Fistulifera solaris
5.7e-12
74.7
336
22.6
pte681360
Paramecium tetraurelia
1.3e-11
73.6
612
21.6
gsu46000
Galdieria sulphuraria
1.7e-11
73.2
447
22.4
pte121990
Paramecium tetraurelia
8.2e-11
70.9
487
19.5
fso75350
Fistulifera solaris
1.1e-10
70.5
289
24.6
pte560530
Paramecium tetraurelia
1.4e-10
70.1
437
21.7
pte285270
Paramecium tetraurelia
1.8e-10
69.7
513
21.1
pte726790
Paramecium tetraurelia
4.1e-10
68.6
563
20.6
pte676990
Paramecium tetraurelia
1.9e-07
59.7
532
22.2
pte184080
Paramecium tetraurelia
2.5e-07
59.3
165
28.5
gsu85730
Galdieria sulphuraria
4.2e-07
58.5
499
23.0
CM14G00460
Cyanidioschyzon merolae
7.2e-07
57.8
178
21.3
gsu17130
Galdieria sulphuraria
9.4e-07
57.4
140
26.4
tps211280
Thalassiosira pseudonana
2.7e-06
55.8
300
23.3
gene8797
Fragilariopsis cylindrus
8.0e-06
54.3
126
25.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (13 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing