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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G45170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G45170
Arabidopsis thaliana
4.9e-117
421.8
205
100.0
AT5G66320
Arabidopsis thaliana
4.4e-25
116.3
84
58.3
AT1G08010
Arabidopsis thaliana
5.4e-23
109.4
120
46.7
AT3G51080
Arabidopsis thaliana
9.3e-23
108.6
69
65.2
AT3G60530
Arabidopsis thaliana
1.2e-22
108.2
126
42.9
AT4G36240
Arabidopsis thaliana
1.6e-22
107.8
103
51.5
AT5G25830
Arabidopsis thaliana
1.6e-22
107.8
89
55.1
AT3G24050
Arabidopsis thaliana
3.5e-22
106.7
73
58.9
AT1G08000
Arabidopsis thaliana
1.7e-21
104.4
100
47.0
AT4G32890
Arabidopsis thaliana
1.7e-21
104.4
138
43.5
AT4G34680
Arabidopsis thaliana
1.7e-21
104.4
170
34.7
AT2G45050
Arabidopsis thaliana
2.3e-21
104.0
67
64.2
Pp3c10_22600
Physcomitrella patens
3.9e-21
103.2
67
62.7
Pp3c10_22480
Physcomitrella patens
6.6e-21
102.4
67
62.7
Pp3c20_22670
Physcomitrella patens
8.7e-21
102.1
131
42.0
AT3G54810
Arabidopsis thaliana
1.5e-20
101.3
70
61.4
Pp3c20_22630
Physcomitrella patens
1.5e-20
101.3
160
36.9
AT2G28340
Arabidopsis thaliana
1.3e-19
98.2
63
63.5
gsu136030
Galdieria sulphuraria
4.5e-09
63.2
99
35.4
AT3G06740
Arabidopsis thaliana
1.7e-08
61.2
72
43.1
ccr20280
Chondrus crispus
2.2e-08
60.8
35
65.7
gsu73870
Galdieria sulphuraria
3.8e-08
60.1
45
53.3
gsu68220
Galdieria sulphuraria
6.4e-08
59.3
48
50.0
Pp3c22_11040
Physcomitrella patens
6.4e-08
59.3
66
42.4
Pp3c22_11080
Physcomitrella patens
6.4e-08
59.3
31
67.7
Pp3c18_14800
Physcomitrella patens
6.4e-08
59.3
35
62.9
Pp3c24_13550
Physcomitrella patens
8.4e-08
58.9
47
53.2
Pp3c8_19750
Physcomitrella patens
8.4e-08
58.9
90
38.9
Pp3c21_15110
Physcomitrella patens
1.4e-07
58.2
31
67.7
AT4G26150
Arabidopsis thaliana
2.4e-07
57.4
34
67.6
Cre08.g358534
Chlamydomonas reinhardtii
3.2e-07
57.0
55
41.8
CM04G01800
Cyanidioschyzon merolae
4.2e-07
56.6
35
60.0
AT4G16141
Arabidopsis thaliana
5.4e-07
56.2
40
57.5
AT5G47140
Arabidopsis thaliana
7.1e-07
55.8
41
56.1
CM18G04930
Cyanidioschyzon merolae
7.1e-07
55.8
35
60.0
Cre01.g025050
Chlamydomonas reinhardtii
9.3e-07
55.5
30
66.7
AT5G26930
Arabidopsis thaliana
1.6e-06
54.7
38
57.9
ccr53380
Chondrus crispus
1.6e-06
54.7
47
53.2
Cre08.g358532
Chlamydomonas reinhardtii
1.6e-06
54.7
34
61.8
AT3G16870
Arabidopsis thaliana
2.1e-06
54.3
40
55.0
AT5G56860
Arabidopsis thaliana
2.1e-06
54.3
29
72.4
Cre08.g378800
Chlamydomonas reinhardtii
2.1e-06
54.3
49
49.0
AT4G36620
Arabidopsis thaliana
2.7e-06
53.9
33
57.6
AT5G49300
Arabidopsis thaliana
2.7e-06
53.9
31
67.7
AT3G50870
Arabidopsis thaliana
3.5e-06
53.5
31
61.3
CM05G01020
Cyanidioschyzon merolae
3.5e-06
53.5
35
57.1
Cre10.g435450
Chlamydomonas reinhardtii
4.6e-06
53.1
40
52.5
Pp3c20_8930
Physcomitrella patens
6.0e-06
52.8
44
52.3
YMR136W
Saccharomyces cerevisiae strain S288C
6.0e-06
52.8
31
64.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (24 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing