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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G30390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G30390
Arabidopsis thaliana
2.5e-257
889.0
461
100.0
AT5G38820
Arabidopsis thaliana
4.4e-190
665.6
435
79.3
Pp3c19_4840
Physcomitrella patens
2.6e-126
453.8
451
52.1
Pp3c18_17440
Physcomitrella patens
3.8e-117
423.3
443
49.2
Pp3c10_3550
Physcomitrella patens
1.3e-101
371.7
436
47.5
AT3G56200
Arabidopsis thaliana
9.4e-100
365.5
431
45.0
AT2G40420
Arabidopsis thaliana
3.0e-98
360.5
430
45.3
AT1G80510
Arabidopsis thaliana
7.8e-78
292.7
419
40.3
Cre02.g145750
Chlamydomonas reinhardtii
5.8e-33
143.7
417
27.6
Cre02.g145700
Chlamydomonas reinhardtii
2.5e-28
128.3
441
26.8
FBgn0050394
Drosophila melanogaster
9.0e-26
119.8
433
24.5
ENSG00000111371
Homo sapiens
4.5e-25
117.5
435
28.3
ENSG00000188338
Homo sapiens
7.6e-25
116.7
432
28.0
ENSG00000134294
Homo sapiens
1.0e-24
116.3
400
28.8
ENSG00000157637
Homo sapiens
2.7e-22
108.2
406
24.1
ps00G129060
Pseudo-nitzschia multiseries
6.1e-22
107.1
493
24.7
PSNMU-V1.4_AUG-EV-PASAV3_0020090
Pseudo-nitzschia multistriata
6.7e-21
103.6
415
25.3
ENSG00000139209
Homo sapiens
3.3e-20
101.3
436
26.4
ENSG00000017483
Homo sapiens
9.7e-20
99.8
397
26.7
ENSG00000139974
Homo sapiens
1.6e-19
99.0
404
24.3
emh251300
Emiliania huxleyi
2.8e-19
98.2
390
27.2
ptri21510
Phaeodactylum tricornutum
3.7e-19
97.8
369
26.6
fso185510
Fistulifera solaris
6.3e-19
97.1
395
25.1
CC00G03320
Cyclotella cryptica
3.1e-18
94.7
311
29.9
fso28000
Fistulifera solaris
4.1e-18
94.4
397
25.7
FBgn0033368
Drosophila melanogaster
5.3e-18
94.0
425
23.1
Sro865_g212750
Seminavis robusta
3.4e-17
91.3
409
23.7
Sro2507_g329710
Seminavis robusta
7.7e-17
90.1
392
26.0
ptri47390
Phaeodactylum tricornutum
1.7e-16
89.0
378
25.7
tps59280
Thalassiosira pseudonana
2.2e-16
88.6
306
26.8
SPBC1685.07c
Schizosaccharomyces pombe
2.9e-16
88.2
410
24.1
tps233290
Thalassiosira pseudonana
2.9e-16
88.2
423
25.8
fso180890
Fistulifera solaris
3.8e-16
87.8
394
23.9
CC00G193430
Cyclotella cryptica
6.5e-16
87.0
388
27.6
Pp3c22_4010
Physcomitrella patens
1.1e-15
86.3
105
48.6
ptri157830
Phaeodactylum tricornutum
1.1e-15
86.3
394
24.9
CC00G76690
Cyclotella cryptica
1.4e-15
85.9
350
24.9
sya00G244640
Synedra acus
1.4e-15
85.9
385
23.9
Ec-01_001120
Ectocarpus siliculosus
4.2e-15
84.3
385
25.5
tho126860
Thalassiosira oceanica
4.2e-15
84.3
316
27.8
AA0002G06620
Aureococcus anophagefferens
9.4e-15
83.2
430
24.0
tho31940
Thalassiosira oceanica
9.4e-15
83.2
279
28.7
ps00G142540
Pseudo-nitzschia multiseries
1.2e-14
82.8
439
24.8
YER119C
Saccharomyces cerevisiae strain S288C
2.1e-14
82.0
321
26.8
gene8425
Fragilariopsis cylindrus
3.6e-14
81.3
390
24.1
ps00G05020
Pseudo-nitzschia multiseries
1.0e-13
79.7
324
26.9
CC00G168820
Cyclotella cryptica
3.0e-13
78.2
308
27.6
YIL088C
Saccharomyces cerevisiae strain S288C
3.9e-13
77.8
313
24.9
tps52510
Thalassiosira pseudonana
3.9e-13
77.8
382
24.6
PSNMU-V1.4_AUG-EV-PASAV3_0098190
Pseudo-nitzschia multistriata
5.1e-13
77.4
452
24.3
Sro2232_g320100
Seminavis robusta
5.1e-13
77.4
360
26.1
ENSG00000103042
Homo sapiens
6.7e-13
77.0
383
25.6
ENSG00000169507
Homo sapiens
8.8e-13
76.6
400
24.5
tps44040
Thalassiosira pseudonana
8.8e-13
76.6
382
25.1
AT4G38250
Arabidopsis thaliana
1.1e-12
76.3
405
23.0
PSNMU-V1.4_AUG-EV-PASAV3_0054680
Pseudo-nitzschia multistriata
1.5e-12
75.9
409
23.5
Naga_100126g24
Nannochloropsis gaditana
2.5e-12
75.1
393
24.7
emh37880
Emiliania huxleyi
3.3e-12
74.7
325
25.5
Sro9_g007230
Seminavis robusta
5.7e-12
73.9
360
25.0
WBGene00021765
Caenorhabditis elegans
7.4e-12
73.6
396
22.5
emh545830
Emiliania huxleyi
7.4e-12
73.6
291
25.8
emh173010
Emiliania huxleyi
9.7e-12
73.2
315
25.7
YBL089W
Saccharomyces cerevisiae strain S288C
9.7e-12
73.2
317
25.2
CC00G207740
Cyclotella cryptica
1.3e-11
72.8
440
23.6
emh104510
Emiliania huxleyi
1.3e-11
72.8
384
24.5
AA0009G00040
Aureococcus anophagefferens
3.7e-11
71.2
308
26.9
emh660670
Emiliania huxleyi
3.7e-11
71.2
291
25.4
AT2G42005
Arabidopsis thaliana
4.8e-11
70.9
417
21.8
emh365000
Emiliania huxleyi
6.3e-11
70.5
389
24.4
ptri72440
Phaeodactylum tricornutum
8.2e-11
70.1
287
26.1
emh594010
Emiliania huxleyi
1.1e-10
69.7
425
23.1
YEL064C
Saccharomyces cerevisiae strain S288C
1.1e-10
69.7
410
23.2
Sro910_g219100
Seminavis robusta
1.8e-10
68.9
385
24.4
Sro293_g109840
Seminavis robusta
1.8e-10
68.9
389
25.4
CC00G189290
Cyclotella cryptica
2.4e-10
68.6
314
25.8
Cre02.g115300
Chlamydomonas reinhardtii
4.1e-10
67.8
306
24.8
emh242350
Emiliania huxleyi
9.1e-10
66.6
411
21.9
ps00G143780
Pseudo-nitzschia multiseries
9.1e-10
66.6
431
23.0
emh711010
Emiliania huxleyi
1.2e-09
66.2
411
21.4
ps00G149840
Pseudo-nitzschia multiseries
1.2e-09
66.2
435
22.5
sya00G173610
Synedra acus
1.2e-09
66.2
271
22.5
emh589010
Emiliania huxleyi
2.0e-09
65.5
310
22.6
emh206740
Emiliania huxleyi
2.0e-09
65.5
310
22.6
AT5G65990
Arabidopsis thaliana
2.6e-09
65.1
398
22.1
gene12642
Fragilariopsis cylindrus
4.5e-09
64.3
419
22.4
PSNMU-V1.4_AUG-EV-PASAV3_0073320
Pseudo-nitzschia multistriata
4.5e-09
64.3
334
23.4
PSNMU-V1.4_AUG-EV-PASAV3_0074890
Pseudo-nitzschia multistriata
5.9e-09
63.9
435
24.1
sya00G113650
Synedra acus
1.7e-08
62.4
401
22.9
AA0002G05630
Aureococcus anophagefferens
2.2e-08
62.0
448
21.4
sya00G59640
Synedra acus
2.2e-08
62.0
455
20.7
sya00G78070
Synedra acus
2.2e-08
62.0
455
20.7
tps00240
Thalassiosira pseudonana
2.2e-08
62.0
318
20.1
AT2G41190
Arabidopsis thaliana
3.8e-08
61.2
479
20.0
Ec-14_002380
Ectocarpus siliculosus
3.8e-08
61.2
403
24.8
tps84670
Thalassiosira pseudonana
3.8e-08
61.2
425
22.6
Sro1311_g261730
Seminavis robusta
5.0e-08
60.8
407
23.6
Pp3c15_7540
Physcomitrella patens
6.5e-08
60.5
406
22.4
Pp3c15_890
Physcomitrella patens
8.5e-08
60.1
440
21.4
fso00130
Fistulifera solaris
1.1e-07
59.7
436
24.1
fso79430
Fistulifera solaris
1.1e-07
59.7
422
24.2
ENSG00000166558
Homo sapiens
1.4e-07
59.3
308
24.7
sya00G52120
Synedra acus
1.4e-07
59.3
331
23.6
tho420160
Thalassiosira oceanica
1.4e-07
59.3
286
22.0
tps196240
Thalassiosira pseudonana
1.9e-07
58.9
375
23.7
fso79420
Fistulifera solaris
2.5e-07
58.5
436
23.9
ptri13950
Phaeodactylum tricornutum
2.5e-07
58.5
429
24.0
Sro787_g202320
Seminavis robusta
2.5e-07
58.5
333
22.2
fso75550
Fistulifera solaris
3.2e-07
58.2
418
22.0
PSNMU-V1.4_AUG-EV-PASAV3_0074880
Pseudo-nitzschia multistriata
3.2e-07
58.2
418
22.7
fso129950
Fistulifera solaris
5.5e-07
57.4
347
23.1
gene17033
Fragilariopsis cylindrus
7.2e-07
57.0
359
22.8
Sro1276_g258600
Seminavis robusta
7.2e-07
57.0
425
21.9
CC00G67210
Cyclotella cryptica
9.4e-07
56.6
480
22.5
gene16806
Fragilariopsis cylindrus
9.4e-07
56.6
417
22.3
emh184460
Emiliania huxleyi
1.6e-06
55.8
325
24.6
tho227600
Thalassiosira oceanica
1.6e-06
55.8
471
23.6
CC00G95060
Cyclotella cryptica
2.1e-06
55.5
269
24.5
AA0003G00860
Aureococcus anophagefferens
2.7e-06
55.1
386
23.1
emh293770
Emiliania huxleyi
2.7e-06
55.1
331
25.1
emh262690
Emiliania huxleyi
2.7e-06
55.1
331
25.1
Naga_100453g2
Nannochloropsis gaditana
2.7e-06
55.1
476
20.8
Sro929_g221340
Seminavis robusta
2.7e-06
55.1
423
20.6
fso104520
Fistulifera solaris
3.6e-06
54.7
347
22.8
emh437500
Emiliania huxleyi
4.7e-06
54.3
340
25.0
fso83850
Fistulifera solaris
4.7e-06
54.3
423
22.0
ptri59180
Phaeodactylum tricornutum
4.7e-06
54.3
429
22.8
ptri224880
Phaeodactylum tricornutum
4.7e-06
54.3
358
22.9
gene2118
Fragilariopsis cylindrus
7.9e-06
53.5
264
23.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (7 genes)
Thalassiosira pseudonana (7 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (8 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (16 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (10 genes)
Synedra acus (6 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing