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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G30260
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G30260
Arabidopsis thaliana
2.1e-130
466.5
250
100.0
AT1G26310
Arabidopsis thaliana
1.5e-51
204.5
208
56.2
AT1G69120
Arabidopsis thaliana
9.2e-49
195.3
232
51.3
AT5G60910
Arabidopsis thaliana
2.3e-47
190.7
252
47.6
AT1G24260
Arabidopsis thaliana
4.0e-36
153.3
174
50.6
Pp3c12_22500
Physcomitrella patens
7.5e-35
149.1
211
45.0
AT5G15800
Arabidopsis thaliana
1.9e-33
144.4
171
48.0
AT2G45650
Arabidopsis thaliana
3.2e-33
143.7
200
46.5
AT2G03710
Arabidopsis thaliana
7.1e-33
142.5
183
43.7
Pp3c14_14900
Physcomitrella patens
3.5e-32
140.2
180
44.4
Pp3c1_30500
Physcomitrella patens
4.6e-32
139.8
171
47.4
Pp3c4_540
Physcomitrella patens
1.7e-31
137.9
176
45.5
AT3G02310
Arabidopsis thaliana
3.9e-31
136.7
171
46.2
Pp3c17_5920
Physcomitrella patens
5.1e-31
136.3
174
44.8
AT3G61120
Arabidopsis thaliana
1.1e-30
135.2
179
48.0
AT2G45660
Arabidopsis thaliana
3.3e-30
133.7
176
45.5
Pp3c3_31980
Physcomitrella patens
7.3e-30
132.5
176
43.2
AT4G11880
Arabidopsis thaliana
1.2e-29
131.7
173
46.2
AT4G09960
Arabidopsis thaliana
3.6e-29
130.2
189
40.7
AT2G42830
Arabidopsis thaliana
2.3e-28
127.5
186
40.9
AT4G22950
Arabidopsis thaliana
6.8e-28
125.9
171
46.2
AT4G37940
Arabidopsis thaliana
4.4e-27
123.2
154
42.2
AT5G62165
Arabidopsis thaliana
1.7e-26
121.3
174
42.0
AT5G51870
Arabidopsis thaliana
2.9e-26
120.6
158
43.0
AT1G71692
Arabidopsis thaliana
4.9e-26
119.8
188
37.8
AT3G58780
Arabidopsis thaliana
4.9e-26
119.8
198
36.4
AT4G18960
Arabidopsis thaliana
6.4e-26
119.4
175
40.6
AT2G14210
Arabidopsis thaliana
1.9e-25
117.9
143
46.2
AT2G22540
Arabidopsis thaliana
3.2e-25
117.1
154
42.2
AT3G57230
Arabidopsis thaliana
7.1e-25
115.9
149
42.3
AT5G23260
Arabidopsis thaliana
4.6e-24
113.2
164
41.5
AT4G24540
Arabidopsis thaliana
6.0e-24
112.8
171
40.4
AT5G65050
Arabidopsis thaliana
6.0e-24
112.8
175
38.3
AT5G10140
Arabidopsis thaliana
7.8e-24
112.5
173
42.8
AT5G65080
Arabidopsis thaliana
1.0e-23
112.1
174
40.8
AT5G20240
Arabidopsis thaliana
1.7e-23
111.3
178
39.3
AT2G22630
Arabidopsis thaliana
2.3e-23
110.9
156
37.8
AT5G13790
Arabidopsis thaliana
3.9e-23
110.2
178
40.4
AT1G77080
Arabidopsis thaliana
5.1e-23
109.8
174
38.5
AT5G65060
Arabidopsis thaliana
3.3e-22
107.1
175
36.6
AT5G51860
Arabidopsis thaliana
5.6e-22
106.3
174
37.9
AT3G57390
Arabidopsis thaliana
7.3e-22
105.9
184
38.6
AT3G54340
Arabidopsis thaliana
1.3e-18
95.1
169
36.7
AT5G65070
Arabidopsis thaliana
2.2e-18
94.4
235
33.6
AT1G31140
Arabidopsis thaliana
1.2e-16
88.6
150
34.7
Pp3c14_22180
Physcomitrella patens
3.5e-16
87.0
116
43.1
ENSG00000116604
Homo sapiens
1.9e-14
81.3
139
39.6
Pp3c3_31810
Physcomitrella patens
4.3e-14
80.1
70
55.7
Pp3c3_31770
Physcomitrella patens
5.6e-14
79.7
70
55.7
Pp3c8_6890
Physcomitrella patens
7.3e-14
79.3
198
33.3
Pp3c12_22890
Physcomitrella patens
1.3e-13
78.6
70
54.3
AT1G77980
Arabidopsis thaliana
1.6e-13
78.2
70
51.4
gsu112310
Galdieria sulphuraria
2.1e-13
77.8
59
59.3
Pp3c17_13070
Physcomitrella patens
2.1e-13
77.8
171
35.7
Pp3c8_6920
Physcomitrella patens
2.1e-13
77.8
70
52.9
Pp3c1_39780
Physcomitrella patens
2.8e-13
77.4
164
36.0
WBGene00003182
Caenorhabditis elegans
3.6e-13
77.0
70
54.3
Pp3c1_39760
Physcomitrella patens
3.6e-13
77.0
171
33.9
ENSG00000068305
Homo sapiens
1.1e-12
75.5
70
52.9
ENSG00000081189
Homo sapiens
1.4e-12
75.1
70
52.9
ENSG00000064489
Homo sapiens
1.8e-12
74.7
70
52.9
ENSG00000213999
Homo sapiens
1.8e-12
74.7
70
52.9
AT1G77950
Arabidopsis thaliana
3.1e-12
73.9
70
50.0
Pp3c25_6940
Physcomitrella patens
3.1e-12
73.9
117
37.6
Pp3c9_1370
Physcomitrella patens
4.0e-12
73.6
211
30.3
AT1G22130
Arabidopsis thaliana
2.0e-11
71.2
211
29.4
Pp3c16_19170
Physcomitrella patens
4.4e-11
70.1
69
49.3
AT2G34440
Arabidopsis thaliana
9.9e-11
68.9
176
27.8
AT1G01530
Arabidopsis thaliana
6.4e-10
66.2
68
47.1
AT5G60440
Arabidopsis thaliana
1.4e-09
65.1
69
44.9
CM01G00950
Cyanidioschyzon merolae
2.4e-09
64.3
78
44.9
AT2G03060
Arabidopsis thaliana
3.2e-09
63.9
73
41.1
AT1G65360
Arabidopsis thaliana
5.4e-09
63.2
86
41.9
AT1G72350
Arabidopsis thaliana
7.1e-09
62.8
73
42.5
AT2G24840
Arabidopsis thaliana
2.1e-08
61.2
172
31.4
AT3G66656
Arabidopsis thaliana
2.1e-08
61.2
57
47.4
AT1G17310
Arabidopsis thaliana
3.5e-08
60.5
73
39.7
AT2G26320
Arabidopsis thaliana
1.3e-07
58.5
71
45.1
AT3G04100
Arabidopsis thaliana
1.3e-07
58.5
68
39.7
AT1G18750
Arabidopsis thaliana
2.3e-07
57.8
164
27.4
AT4G36590
Arabidopsis thaliana
3.9e-07
57.0
179
25.7
Cre11.g467577
Chlamydomonas reinhardtii
5.1e-07
56.6
78
41.0
YBR182C
Saccharomyces cerevisiae strain S288C
6.6e-07
56.2
84
34.5
AT1G69540
Arabidopsis thaliana
8.7e-07
55.8
185
28.1
emh498610
Emiliania huxleyi
8.7e-07
55.8
67
40.3
YPL089C
Saccharomyces cerevisiae strain S288C
1.1e-06
55.5
59
42.4
AT3G05860
Arabidopsis thaliana
3.3e-06
53.9
161
27.3
WBGene00006844
Caenorhabditis elegans
3.3e-06
53.9
57
45.6
FBgn0004101
Drosophila melanogaster
3.3e-06
53.9
57
43.9
ENSG00000112658
Homo sapiens
4.3e-06
53.5
57
43.9
YMR043W
Saccharomyces cerevisiae strain S288C
4.3e-06
53.5
56
48.2
AT1G28460
Arabidopsis thaliana
5.6e-06
53.1
108
29.6
Pp3c17_24040
Physcomitrella patens
5.6e-06
53.1
73
38.4
AT1G29962
Arabidopsis thaliana
9.6e-06
52.4
119
28.6
YMR042W
Saccharomyces cerevisiae strain S288C
9.6e-06
52.4
51
49.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (59 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (19 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing