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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G27060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G27060
Arabidopsis thaliana
1.7e-196
686.4
333
100.0
Pp3c25_1550
Physcomitrella patens
3.4e-152
539.3
335
78.5
Pp3c6_23160
Physcomitrella patens
2.9e-151
536.2
337
78.3
Pp3c5_4530
Physcomitrella patens
3.2e-150
532.7
337
77.4
Cre12.g491050
Chlamydomonas reinhardtii
7.5e-139
495.0
330
72.7
AT3G23580
Arabidopsis thaliana
1.7e-138
493.8
329
73.6
Ec-19_000440
Ectocarpus siliculosus
1.2e-133
477.6
327
69.4
gsu76380
Galdieria sulphuraria
7.5e-131
468.4
319
70.8
gsu17430
Galdieria sulphuraria
3.7e-130
466.1
327
70.0
tps107780
Thalassiosira pseudonana
5.4e-129
462.2
329
69.3
ENSG00000171848
Homo sapiens
5.0e-127
455.7
333
68.8
CC00G27780
Cyclotella cryptica
6.5e-127
455.3
329
67.8
CC00G51360
Cyclotella cryptica
6.5e-127
455.3
329
67.8
CC00G154100
Cyclotella cryptica
6.5e-127
455.3
329
67.8
CM12G00500
Cyanidioschyzon merolae
1.5e-126
454.1
321
67.3
AA0016G00960
Aureococcus anophagefferens
2.5e-126
453.4
328
67.7
Cre12.g509400
Chlamydomonas reinhardtii
5.5e-126
452.2
330
67.0
Sro440_g143330
Seminavis robusta
5.5e-126
452.2
329
66.9
PSNMU-V1.4_AUG-EV-PASAV3_0005980
Pseudo-nitzschia multistriata
7.2e-126
451.8
328
67.7
Ec-09_002740
Ectocarpus siliculosus
1.6e-125
450.7
332
66.6
fso148260
Fistulifera solaris
3.6e-125
449.5
331
66.8
fso95680
Fistulifera solaris
8.0e-125
448.4
331
66.5
tho290960
Thalassiosira oceanica
8.0e-125
448.4
331
67.7
Naga_100133g14
Nannochloropsis gaditana
1.0e-124
448.0
331
67.1
ptri50410
Phaeodactylum tricornutum
1.4e-124
447.6
328
66.8
pte250210
Paramecium tetraurelia
2.3e-124
446.8
328
65.9
pte384200
Paramecium tetraurelia
3.0e-124
446.4
328
66.2
CM11G00340
Cyanidioschyzon merolae
2.0e-123
443.7
327
66.7
sya00G100190
Synedra acus
4.4e-123
442.6
328
65.5
FBgn0011704
Drosophila melanogaster
3.7e-122
439.5
328
67.4
ps00G17930
Pseudo-nitzschia multiseries
3.1e-121
436.4
328
66.2
AA0009G03040
Aureococcus anophagefferens
3.5e-120
433.0
319
66.8
tps134660
Thalassiosira pseudonana
5.0e-119
429.1
305
65.2
tps05910
Thalassiosira pseudonana
6.6e-119
428.7
305
69.5
CC00G202160
Cyclotella cryptica
1.1e-118
427.9
309
64.1
SPBC25D12.04
Schizosaccharomyces pombe
1.9e-118
427.2
329
64.7
ptri221910
Phaeodactylum tricornutum
3.3e-118
426.4
318
63.5
ps00G56880
Pseudo-nitzschia multiseries
7.3e-118
425.2
329
60.8
tho131920
Thalassiosira oceanica
9.5e-118
424.9
305
64.9
gene10662
Fragilariopsis cylindrus
1.2e-117
424.5
308
68.2
gene4126
Fragilariopsis cylindrus
1.2e-117
424.5
308
68.2
YJL026W
Saccharomyces cerevisiae strain S288C
1.2e-117
424.5
329
64.4
sya00G53670
Synedra acus
4.0e-116
419.5
329
60.5
emh107580
Emiliania huxleyi
5.2e-116
419.1
402
56.7
gene7279
Fragilariopsis cylindrus
5.2e-116
419.1
330
60.0
Sro151_g069180
Seminavis robusta
8.9e-116
418.3
327
61.8
fso125870
Fistulifera solaris
5.4e-113
409.1
310
62.9
ccr115600
Chondrus crispus
7.0e-113
408.7
299
63.9
fso16310
Fistulifera solaris
9.2e-113
408.3
310
62.9
WBGene00004392
Caenorhabditis elegans
2.5e-110
400.2
308
64.3
AA0006G05100
Aureococcus anophagefferens
2.8e-109
396.7
309
61.5
ccr149920
Chondrus crispus
1.5e-94
347.8
299
57.5
tho597260
Thalassiosira oceanica
3.8e-90
333.2
235
69.4
emh199890
Emiliania huxleyi
4.7e-85
316.2
332
51.8
Ec-06_005570
Ectocarpus siliculosus
1.8e-84
314.3
303
48.5
YGR180C
Saccharomyces cerevisiae strain S288C
5.8e-75
282.7
329
44.4
emh698280
Emiliania huxleyi
1.0e-58
228.8
327
41.9
WBGene00017610
Caenorhabditis elegans
1.9e-57
224.6
211
54.0
gsu08260
Galdieria sulphuraria
6.3e-53
209.5
301
39.9
Naga_100410g1
Nannochloropsis gaditana
3.1e-12
74.3
47
66.0
sya00G187530
Synedra acus
2.3e-07
58.2
169
26.6
tho598480
Thalassiosira oceanica
5.2e-07
57.0
39
56.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing