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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G25940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G25940
Arabidopsis thaliana
2.6e-65
249.2
120
100.0
AT1G20065
Arabidopsis thaliana
8.1e-19
94.7
53
81.1
Pp3c24_7070
Physcomitrella patens
5.4e-15
82.0
154
31.8
Cre01.g018000
Chlamydomonas reinhardtii
9.6e-12
71.2
121
32.2
emh660250
Emiliania huxleyi
1.1e-10
67.8
118
33.9
emh646240
Emiliania huxleyi
1.1e-10
67.8
118
33.9
gsu74710
Galdieria sulphuraria
2.4e-10
66.6
117
34.2
ENSG00000066379
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000235443
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000224859
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000236949
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000235176
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000236808
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000206502
Homo sapiens
3.1e-10
66.2
110
33.6
ENSG00000233795
Homo sapiens
3.1e-10
66.2
110
33.6
SPCC1259.03
Schizosaccharomyces pombe
2.0e-09
63.5
110
30.9
fso100640
Fistulifera solaris
3.4e-09
62.8
110
34.5
PSNMU-V1.4_AUG-EV-PASAV3_0011250
Pseudo-nitzschia multistriata
9.9e-09
61.2
116
33.6
WBGene00007616
Caenorhabditis elegans
6.4e-08
58.5
110
33.6
Ec-24_002610
Ectocarpus siliculosus
6.4e-08
58.5
108
30.6
FBgn0038903
Drosophila melanogaster
1.1e-07
57.8
109
28.4
Cre02.g102400
Chlamydomonas reinhardtii
2.4e-07
56.6
115
33.9
ptri196090
Phaeodactylum tricornutum
2.4e-07
56.6
75
40.0
Sro37_g023050
Seminavis robusta
3.2e-07
56.2
115
33.9
YJR063W
Saccharomyces cerevisiae strain S288C
4.2e-07
55.8
120
33.3
pte315220
Paramecium tetraurelia
1.2e-06
54.3
107
32.7
ENSG00000161980
Homo sapiens
2.7e-06
53.1
115
30.4
CM05G00240
Cyanidioschyzon merolae
3.5e-06
52.8
112
35.7
tho293220
Thalassiosira oceanica
4.6e-06
52.4
112
28.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (9 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing