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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G18290
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G18290
Arabidopsis thaliana
0.0e+00
2514.6
1255
100.0
Pp3c25_14501
Physcomitrella patens
0.0e+00
1096.6
1284
48.3
Pp3c25_14500
Physcomitrella patens
0.0e+00
1096.6
1284
48.3
Pp3c6_1960
Physcomitrella patens
6.4e-308
1058.5
1310
46.5
AT1G74770
Arabidopsis thaliana
4.1e-222
773.5
1286
36.5
AT1G18910
Arabidopsis thaliana
1.3e-215
751.9
1308
35.3
Cre05.g248550
Chlamydomonas reinhardtii
4.1e-113
411.4
771
32.6
gsu76240
Galdieria sulphuraria
3.2e-102
375.2
1289
26.0
CM13G01410
Cyanidioschyzon merolae
2.6e-91
339.0
649
31.4
ccr161060
Chondrus crispus
3.5e-88
328.6
627
32.7
fso155640
Fistulifera solaris
1.0e-79
300.4
664
28.5
Naga_100090g9
Nannochloropsis gaditana
2.6e-75
285.8
770
27.4
sya00G162130
Synedra acus
9.8e-75
283.9
680
29.3
Ec-26_004520
Ectocarpus siliculosus
8.3e-74
280.8
267
48.7
fso150310
Fistulifera solaris
7.8e-64
247.7
610
27.7
ccr65580
Chondrus crispus
3.9e-63
245.4
254
43.7
CC00G86210
Cyclotella cryptica
1.1e-62
243.8
265
43.4
tho87860
Thalassiosira oceanica
5.8e-59
231.5
671
27.4
ccr36960
Chondrus crispus
1.1e-57
227.3
322
35.1
SPAC2F3.16
Schizosaccharomyces pombe
1.9e-57
226.5
350
34.3
tps146910
Thalassiosira pseudonana
2.5e-54
216.1
213
45.5
ENSG00000163743
Homo sapiens
4.3e-54
215.3
225
44.9
FBgn0031816
Drosophila melanogaster
1.1e-49
200.7
244
40.2
ps00G05920
Pseudo-nitzschia multiseries
1.6e-48
196.8
261
36.0
AT3G62970
Arabidopsis thaliana
9.6e-46
187.6
287
36.6
AT5G22920
Arabidopsis thaliana
3.1e-44
182.6
260
36.2
sya00G161050
Synedra acus
4.5e-43
178.7
252
38.5
Pp3c14_5600
Physcomitrella patens
4.9e-42
175.3
251
36.7
Pp3c2_31820
Physcomitrella patens
6.4e-42
174.9
250
36.4
Pp3c1_6070
Physcomitrella patens
1.4e-41
173.7
262
35.1
Pp3c11_6970
Physcomitrella patens
3.5e-40
169.1
247
35.6
fso77080
Fistulifera solaris
1.8e-39
166.8
322
32.0
ptri130290
Phaeodactylum tricornutum
1.1e-38
164.1
245
36.7
Sro968_g226070
Seminavis robusta
1.1e-38
164.1
245
36.3
Pp3c10_4820
Physcomitrella patens
2.5e-38
162.9
247
34.0
Sro99_g050950
Seminavis robusta
1.3e-37
160.6
245
35.9
gene16313
Fragilariopsis cylindrus
1.6e-37
160.2
264
34.5
ps00G33510
Pseudo-nitzschia multiseries
1.4e-36
157.1
244
34.4
AT5G18650
Arabidopsis thaliana
1.8e-36
156.8
258
32.2
Cre17.g718300
Chlamydomonas reinhardtii
4.0e-36
155.6
250
33.6
fso160310
Fistulifera solaris
2.6e-35
152.9
322
30.7
gene11141
Fragilariopsis cylindrus
4.9e-34
148.7
197
35.5
tps130000
Thalassiosira pseudonana
8.4e-34
147.9
253
33.6
tps142420
Thalassiosira pseudonana
1.6e-32
143.7
244
34.0
fso191720
Fistulifera solaris
2.1e-32
143.3
256
34.0
fso77050
Fistulifera solaris
2.7e-32
142.9
256
34.0
tho217020
Thalassiosira oceanica
4.6e-32
142.1
257
31.9
AT5G25560
Arabidopsis thaliana
1.0e-31
141.0
214
34.6
Sro345_g122370
Seminavis robusta
1.0e-31
141.0
502
25.9
Sro70_g039030
Seminavis robusta
1.0e-31
141.0
296
31.4
sya00G196410
Synedra acus
1.1e-30
137.5
279
31.5
ps00G65070
Pseudo-nitzschia multiseries
1.6e-29
133.7
281
31.0
pte243060
Paramecium tetraurelia
4.8e-29
132.1
260
31.5
fso73640
Fistulifera solaris
8.2e-29
131.3
372
27.2
ptri72160
Phaeodactylum tricornutum
1.1e-28
131.0
275
30.5
tps193950
Thalassiosira pseudonana
3.1e-28
129.4
244
33.2
gene18213
Fragilariopsis cylindrus
4.0e-28
129.0
277
30.0
CC00G149660
Cyclotella cryptica
3.4e-27
125.9
329
26.7
fso199510
Fistulifera solaris
3.4e-27
125.9
438
25.6
ptri69840
Phaeodactylum tricornutum
5.8e-27
125.2
290
29.3
fso43770
Fistulifera solaris
9.3e-25
117.9
279
28.0
fso64760
Fistulifera solaris
9.3e-25
117.9
279
28.0
Sro695_g188680
Seminavis robusta
1.2e-24
117.5
270
28.9
pte443830
Paramecium tetraurelia
2.1e-24
116.7
246
30.9
pte760660
Paramecium tetraurelia
1.9e-22
110.2
250
30.8
ccr27680
Chondrus crispus
3.3e-22
109.4
150
36.7
CC00G122160
Cyclotella cryptica
4.3e-22
109.0
321
28.7
ccr143140
Chondrus crispus
2.4e-20
103.2
178
33.7
CC00G69060
Cyclotella cryptica
3.8e-18
95.9
187
29.9
sya00G00440
Synedra acus
2.5e-17
93.2
155
35.5
Sro9_g007140
Seminavis robusta
1.0e-15
87.8
146
34.2
ptri149450
Phaeodactylum tricornutum
4.3e-14
82.4
356
23.3
fso151710
Fistulifera solaris
9.1e-12
74.7
210
23.8
tps146890
Thalassiosira pseudonana
3.0e-07
59.7
259
22.4
tho328140
Thalassiosira oceanica
5.1e-07
58.9
209
25.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (11 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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