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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G16090
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G16090
Arabidopsis thaliana
1.4e-271
936.4
493
100.0
AT1G65040
Arabidopsis thaliana
1.1e-178
627.9
493
71.0
Pp3c16_2890
Physcomitrella patens
3.9e-128
459.9
442
57.9
Cre04.g217922
Chlamydomonas reinhardtii
2.3e-88
327.8
333
52.3
ccr128240
Chondrus crispus
1.2e-76
288.9
329
45.3
ENSG00000162298
Homo sapiens
6.0e-68
260.0
331
44.4
Naga_100011g51
Nannochloropsis gaditana
3.0e-67
257.7
337
43.0
FBgn0039875
Drosophila melanogaster
8.4e-62
239.6
360
39.4
gsu122750
Galdieria sulphuraria
7.1e-61
236.5
356
39.9
WBGene00004768
Caenorhabditis elegans
5.6e-58
226.9
346
39.0
gsu122730
Galdieria sulphuraria
4.7e-57
223.8
317
40.7
CM07G01900
Cyanidioschyzon merolae
8.1e-57
223.0
427
34.2
emh327260
Emiliania huxleyi
1.2e-52
209.1
293
40.6
AA0054G00050
Aureococcus anophagefferens
3.4e-47
191.0
306
38.9
emh103250
Emiliania huxleyi
2.1e-41
171.8
230
40.9
gene16176
Fragilariopsis cylindrus
6.9e-40
166.8
339
33.6
gene4449
Fragilariopsis cylindrus
9.9e-39
162.9
398
30.9
SPBC17D11.02c
Schizosaccharomyces pombe
1.3e-38
162.5
448
29.9
fso117030
Fistulifera solaris
3.8e-38
161.0
407
32.4
fso72960
Fistulifera solaris
5.5e-37
157.1
421
31.1
ps00G146670
Pseudo-nitzschia multiseries
2.7e-36
154.8
356
31.7
Sro6_g005140
Seminavis robusta
3.5e-36
154.5
365
31.5
sya00G39610
Synedra acus
2.3e-35
151.8
395
30.6
ptri26120
Phaeodactylum tricornutum
2.1e-33
145.2
416
32.0
tps27790
Thalassiosira pseudonana
6.5e-30
133.7
501
26.1
CC00G72160
Cyclotella cryptica
3.0e-27
124.8
544
25.0
PSNMU-V1.4_AUG-EV-PASAV3_0044820
Pseudo-nitzschia multistriata
1.9e-26
122.1
336
28.6
ENSG00000159461
Homo sapiens
3.3e-26
121.3
403
28.8
pte575230
Paramecium tetraurelia
1.8e-24
115.5
436
23.4
pte505110
Paramecium tetraurelia
1.3e-22
109.4
332
23.8
Ec-28_002940
Ectocarpus siliculosus
3.6e-20
101.3
173
33.5
Pp3c13_9770
Physcomitrella patens
1.9e-18
95.5
345
26.7
AT4G25230
Arabidopsis thaliana
1.7e-17
92.4
344
27.6
Pp3c3_10340
Physcomitrella patens
1.5e-15
85.9
328
25.9
emh266500
Emiliania huxleyi
3.4e-15
84.7
73
49.3
AT5G51450
Arabidopsis thaliana
1.7e-14
82.4
342
26.3
gene20067
Fragilariopsis cylindrus
4.6e-12
74.3
130
37.7
YOL013C
Saccharomyces cerevisiae strain S288C
3.7e-09
64.7
146
28.8
ps00G93700
Pseudo-nitzschia multiseries
8.2e-09
63.5
79
44.3
PSNMU-V1.4_AUG-EV-PASAV3_0056150
Pseudo-nitzschia multistriata
1.8e-08
62.4
73
46.6
AT5G01960
Arabidopsis thaliana
4.1e-08
61.2
128
32.8
Pp3c2_29180
Physcomitrella patens
9.1e-08
60.1
56
46.4
sya00G159240
Synedra acus
9.1e-08
60.1
94
38.3
sya00G193410
Synedra acus
1.2e-07
59.7
89
41.6
Ec-07_004640
Ectocarpus siliculosus
2.0e-07
58.9
96
38.5
FBgn0039150
Drosophila melanogaster
3.4e-07
58.2
53
45.3
pte729470
Paramecium tetraurelia
3.4e-07
58.2
331
22.7
ptri87800
Phaeodactylum tricornutum
3.4e-07
58.2
84
36.9
fso182000
Fistulifera solaris
5.9e-07
57.4
136
31.6
ENSG00000198919
Homo sapiens
5.9e-07
57.4
60
41.7
sya00G62340
Synedra acus
1.0e-06
56.6
141
31.2
SPAC144.05
Schizosaccharomyces pombe
1.7e-06
55.8
94
31.9
ENSG00000135119
Homo sapiens
2.2e-06
55.5
101
32.7
pte396040
Paramecium tetraurelia
2.2e-06
55.5
55
41.8
tps176480
Thalassiosira pseudonana
2.2e-06
55.5
128
30.5
Sro22_g015460
Seminavis robusta
3.8e-06
54.7
86
34.9
AA0014G01990
Aureococcus anophagefferens
5.0e-06
54.3
68
42.6
fso41050
Fistulifera solaris
5.0e-06
54.3
158
29.7
Pp3c6_21080
Physcomitrella patens
6.5e-06
53.9
43
48.8
AT1G73760
Arabidopsis thaliana
8.5e-06
53.5
53
37.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (4 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing