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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G09750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G09750
Arabidopsis thaliana
4.1e-90
332.0
162
100.0
AT5G51250
Arabidopsis thaliana
6.0e-33
142.1
186
49.5
AT5G38680
Arabidopsis thaliana
1.3e-27
124.4
182
46.2
AT4G25710
Arabidopsis thaliana
1.9e-26
120.6
178
46.1
AT4G39560
Arabidopsis thaliana
3.6e-22
106.3
165
44.2
AT3G08810
Arabidopsis thaliana
1.4e-21
104.4
168
45.2
AT4G39600
Arabidopsis thaliana
2.6e-20
100.1
173
39.3
AT3G06570
Arabidopsis thaliana
7.6e-20
98.6
185
38.9
AT4G39550
Arabidopsis thaliana
2.9e-19
96.7
180
36.7
AT4G39580
Arabidopsis thaliana
6.4e-19
95.5
165
39.4
AT4G39570
Arabidopsis thaliana
3.2e-18
93.2
180
42.2
AT1G61540
Arabidopsis thaliana
1.1e-15
84.7
71
50.7
AT1G60570
Arabidopsis thaliana
3.3e-15
83.2
173
37.0
AT5G38670
Arabidopsis thaliana
9.6e-15
81.6
161
38.5
AT1G19930
Arabidopsis thaliana
1.2e-14
81.3
84
53.6
AT2G20380
Arabidopsis thaliana
2.8e-14
80.1
154
39.0
AT5G48990
Arabidopsis thaliana
4.7e-14
79.3
187
33.2
AT5G49000
Arabidopsis thaliana
1.4e-13
77.8
99
49.5
AT5G39560
Arabidopsis thaliana
4.0e-13
76.3
83
48.2
AT4G39590
Arabidopsis thaliana
9.0e-13
75.1
173
32.4
AT4G05620
Arabidopsis thaliana
3.8e-11
69.7
71
56.3
AT5G48980
Arabidopsis thaliana
8.4e-11
68.6
58
62.1
AT4G23580
Arabidopsis thaliana
2.7e-09
63.5
53
60.4
AT4G38940
Arabidopsis thaliana
1.0e-08
61.6
52
57.7
AT4G11770
Arabidopsis thaliana
2.3e-08
60.5
56
58.9
AT4G11750
Arabidopsis thaliana
3.0e-08
60.1
73
46.6
AT2G44630
Arabidopsis thaliana
1.1e-07
58.2
194
29.4
AT1G19470
Arabidopsis thaliana
1.9e-07
57.4
163
31.9
AT1G19460
Arabidopsis thaliana
5.6e-07
55.8
160
33.8
AT3G10510
Arabidopsis thaliana
5.6e-07
55.8
74
41.9
AT2G21950
Arabidopsis thaliana
9.6e-07
55.1
82
42.7
AT4G39290
Arabidopsis thaliana
9.6e-07
55.1
180
31.7
AT4G39760
Arabidopsis thaliana
9.6e-07
55.1
172
30.8
AT5G03000
Arabidopsis thaliana
9.6e-07
55.1
164
32.3
AT3G43710
Arabidopsis thaliana
1.6e-06
54.3
52
57.7
AT3G46050
Arabidopsis thaliana
2.1e-06
53.9
167
31.1
AT4G33900
Arabidopsis thaliana
2.1e-06
53.9
50
58.0
AT4G19870
Arabidopsis thaliana
3.6e-06
53.1
148
31.8
AT5G02980
Arabidopsis thaliana
4.8e-06
52.8
50
52.0
AT4G29370
Arabidopsis thaliana
6.2e-06
52.4
171
34.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (40 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing