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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G08943
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G08943
Arabidopsis thaliana
0.0e+00
1695.2
872
100.0
AT3G08947
Arabidopsis thaliana
0.0e+00
1644.8
870
97.2
Pp3c7_5160
Physcomitrella patens
0.0e+00
1103.6
873
64.8
Pp3c11_26710
Physcomitrella patens
0.0e+00
1101.3
874
65.0
AT5G53480
Arabidopsis thaliana
5.4e-290
998.4
873
59.6
tho198140
Thalassiosira oceanica
1.2e-183
645.2
886
41.1
emh653510
Emiliania huxleyi
5.8e-183
642.9
911
40.6
emh122780
Emiliania huxleyi
5.8e-183
642.9
911
40.6
CC00G60180
Cyclotella cryptica
1.7e-182
641.3
882
41.0
CC00G195740
Cyclotella cryptica
1.7e-182
641.3
882
41.0
tps142460
Thalassiosira pseudonana
1.3e-177
625.2
816
42.2
Naga_100038g31
Nannochloropsis gaditana
4.4e-175
616.7
897
40.0
AA0063G00130
Aureococcus anophagefferens
2.3e-171
604.4
834
41.8
gsu48080
Galdieria sulphuraria
8.7e-171
602.4
886
41.3
Cre01.g034000
Chlamydomonas reinhardtii
2.6e-167
590.9
850
39.8
Ec-00_001960
Ectocarpus siliculosus
1.4e-165
585.1
830
38.0
AA0039G00320
Aureococcus anophagefferens
1.8e-163
578.2
785
42.9
ENSG00000108424
Homo sapiens
3.1e-160
567.4
889
37.8
SPAC1B1.03c
Schizosaccharomyces pombe
4.3e-154
547.0
879
38.1
Sro1968_g308410
Seminavis robusta
1.6e-153
545.0
875
37.4
sya00G98290
Synedra acus
4.2e-149
530.4
880
35.6
FBgn0262743
Drosophila melanogaster
6.7e-147
523.1
891
35.8
PSNMU-V1.4_AUG-EV-PASAV3_0069450
Pseudo-nitzschia multistriata
6.1e-140
500.0
891
35.0
ps00G137390
Pseudo-nitzschia multiseries
4.1e-136
487.3
887
34.2
ptri54800
Phaeodactylum tricornutum
3.8e-134
480.7
888
33.1
gene14613
Fragilariopsis cylindrus
1.2e-132
475.7
824
34.6
gene15143
Fragilariopsis cylindrus
1.2e-132
475.7
824
34.6
WBGene00002075
Caenorhabditis elegans
3.7e-129
464.2
856
34.2
CM15G00560
Cyanidioschyzon merolae
4.0e-123
444.1
900
32.2
fso84520
Fistulifera solaris
3.7e-121
437.6
878
32.0
fso170170
Fistulifera solaris
2.4e-120
434.9
882
31.9
ccr103620
Chondrus crispus
1.5e-114
415.6
700
37.3
pte295450
Paramecium tetraurelia
6.7e-46
187.6
799
21.7
pte76110
Paramecium tetraurelia
2.1e-44
182.6
800
22.1
pte573970
Paramecium tetraurelia
1.7e-41
172.9
798
22.2
Ec-10_003170
Ectocarpus siliculosus
5.3e-19
98.2
785
21.5
WBGene00002076
Caenorhabditis elegans
5.9e-18
94.7
784
20.9
Cre12.g520550
Chlamydomonas reinhardtii
8.5e-17
90.9
549
23.3
FBgn0035693
Drosophila melanogaster
1.9e-16
89.7
493
21.5
SPAC2F3.06c
Schizosaccharomyces pombe
2.4e-11
72.8
762
18.9
ENSG00000083312
Homo sapiens
3.1e-11
72.4
566
21.2
AT2G16960
Arabidopsis thaliana
1.0e-09
67.4
253
28.1
ps00G33740
Pseudo-nitzschia multiseries
1.0e-09
67.4
535
21.7
Pp3c4_7610
Physcomitrella patens
1.7e-09
66.6
401
22.9
AT4G27640
Arabidopsis thaliana
1.6e-07
60.1
410
22.7
PSNMU-V1.4_AUG-EV-PASAV3_0108760
Pseudo-nitzschia multistriata
2.7e-07
59.3
538
20.3
tps121170
Thalassiosira pseudonana
4.7e-07
58.5
441
21.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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