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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G05720
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G05720
Arabidopsis thaliana
1.8e-195
683.7
529
100.0
Pp3c1_19400
Physcomitrella patens
3.0e-81
304.3
428
67.3
AT3G06720
Arabidopsis thaliana
3.9e-81
303.9
444
59.2
Pp3c2_20690
Physcomitrella patens
5.6e-80
300.1
428
67.5
Pp3c1_15750
Physcomitrella patens
7.3e-80
299.7
427
67.7
AT4G02150
Arabidopsis thaliana
2.2e-76
288.1
428
64.7
Cre04.g215850
Chlamydomonas reinhardtii
8.1e-63
243.0
443
60.7
AT4G16143
Arabidopsis thaliana
8.4e-60
233.0
443
49.2
AT1G09270
Arabidopsis thaliana
7.1e-59
229.9
428
54.2
Pp3c1_14980
Physcomitrella patens
2.1e-55
218.4
429
59.9
Pp3c2_20660
Physcomitrella patens
2.0e-53
211.8
429
59.4
emh630580
Emiliania huxleyi
4.5e-53
210.7
242
62.4
emh87490
Emiliania huxleyi
4.5e-53
210.7
242
62.4
gsu58870
Galdieria sulphuraria
2.2e-52
208.4
236
64.4
Sro190_g081800
Seminavis robusta
1.2e-50
202.6
223
51.1
CC00G57700
Cyclotella cryptica
3.5e-50
201.1
226
61.1
Ec-06_010020
Ectocarpus siliculosus
1.3e-49
199.1
227
60.4
gsu115000
Galdieria sulphuraria
1.9e-48
195.3
214
62.6
AA0005G01170
Aureococcus anophagefferens
5.6e-48
193.7
213
64.8
ps00G15650
Pseudo-nitzschia multiseries
2.8e-47
191.4
213
62.9
gene1481
Fragilariopsis cylindrus
3.7e-47
191.0
213
62.9
Naga_100025g3
Nannochloropsis gaditana
6.2e-47
190.3
211
63.0
ptri79640
Phaeodactylum tricornutum
6.2e-47
190.3
225
60.4
tps81770
Thalassiosira pseudonana
2.0e-45
185.3
214
63.1
fso138040
Fistulifera solaris
4.5e-45
184.1
220
60.5
fso142400
Fistulifera solaris
4.5e-45
184.1
220
60.5
AT5G52000
Arabidopsis thaliana
1.4e-43
179.1
433
43.4
FBgn0024889
Drosophila melanogaster
1.0e-41
172.9
229
42.4
CM20G00960
Cyanidioschyzon merolae
1.5e-37
159.1
209
61.7
AT5G49310
Arabidopsis thaliana
2.2e-36
155.2
208
43.3
pte678530
Paramecium tetraurelia
2.2e-36
155.2
254
47.2
pte499220
Paramecium tetraurelia
3.8e-36
154.5
254
47.6
AT1G02690
Arabidopsis thaliana
1.1e-35
152.9
179
48.6
ccr144980
Chondrus crispus
1.9e-35
152.1
211
56.4
AA0005G05820
Aureococcus anophagefferens
9.3e-35
149.8
257
37.0
Ec-03_002730
Ectocarpus siliculosus
1.0e-33
146.4
260
47.3
sya00G86210
Synedra acus
3.0e-33
144.8
261
36.0
emh327020
Emiliania huxleyi
2.5e-32
141.7
437
33.2
Naga_100210g8
Nannochloropsis gaditana
2.8e-31
138.3
217
42.4
sya00G29650
Synedra acus
3.1e-30
134.8
210
57.1
tho101480
Thalassiosira oceanica
5.3e-30
134.0
228
38.2
Naga_100068g7
Nannochloropsis gaditana
1.0e-28
129.8
262
41.6
tps62720
Thalassiosira pseudonana
1.4e-27
125.9
200
37.5
FBgn0267727
Drosophila melanogaster
1.9e-27
125.6
218
52.3
pte794670
Paramecium tetraurelia
1.9e-27
125.6
218
49.1
CC00G181010
Cyclotella cryptica
1.2e-26
122.9
198
34.3
ptri73900
Phaeodactylum tricornutum
1.6e-26
122.5
252
34.9
Ec-11_005880
Ectocarpus siliculosus
2.1e-26
122.1
234
34.6
Ec-21_003780
Ectocarpus siliculosus
7.9e-26
120.2
198
47.0
WBGene00002073
Caenorhabditis elegans
1.8e-25
119.0
290
31.4
Ec-06_010170
Ectocarpus siliculosus
1.5e-24
115.9
243
33.3
FBgn0027338
Drosophila melanogaster
3.3e-24
114.8
217
35.0
PSNMU-V1.4_AUG-EV-PASAV3_0031160
Pseudo-nitzschia multistriata
7.4e-24
113.6
270
36.3
ps00G02620
Pseudo-nitzschia multiseries
1.3e-23
112.8
264
37.1
Sro1070_g237780
Seminavis robusta
4.8e-23
110.9
203
34.5
ENSG00000025800
Homo sapiens
6.3e-23
110.5
172
44.8
ENSG00000196911
Homo sapiens
6.3e-23
110.5
195
46.7
emh734390
Emiliania huxleyi
1.8e-22
109.0
218
32.6
pte397010
Paramecium tetraurelia
1.2e-21
106.3
245
26.5
ENSG00000182481
Homo sapiens
1.5e-21
105.9
177
57.1
ENSG00000186432
Homo sapiens
4.5e-21
104.4
175
35.4
ENSG00000185467
Homo sapiens
5.9e-21
104.0
186
56.5
Ec-06_010200
Ectocarpus siliculosus
7.7e-21
103.6
243
32.9
Ec-06_010180
Ectocarpus siliculosus
7.7e-21
103.6
243
32.9
ENSG00000114030
Homo sapiens
2.2e-20
102.1
186
55.4
ENSG00000102753
Homo sapiens
1.1e-19
99.8
171
35.7
pte200570
Paramecium tetraurelia
4.2e-19
97.8
276
26.4
SPCC962.03c
Schizosaccharomyces pombe
4.7e-18
94.4
185
50.3
WBGene00002074
Caenorhabditis elegans
1.8e-17
92.4
221
37.1
gene17663
Fragilariopsis cylindrus
8.8e-17
90.1
218
33.0
emh323340
Emiliania huxleyi
2.0e-16
89.0
85
54.1
pte396910
Paramecium tetraurelia
2.6e-16
88.6
281
27.0
Cre04.g224650
Chlamydomonas reinhardtii
7.4e-16
87.0
258
41.5
AA0308G00020
Aureococcus anophagefferens
9.7e-16
86.7
290
29.0
Pp3c18_21610
Physcomitrella patens
1.7e-15
85.9
250
28.4
Pp3c21_840
Physcomitrella patens
1.8e-14
82.4
241
28.6
AA0017G00730
Aureococcus anophagefferens
3.1e-14
81.6
282
27.7
pte62800
Paramecium tetraurelia
1.6e-13
79.3
280
23.6
SPBC1604.08c
Schizosaccharomyces pombe
2.0e-13
79.0
179
52.0
pte12450
Paramecium tetraurelia
2.6e-13
78.6
279
21.9
sya00G05300
Synedra acus
5.9e-13
77.4
170
33.5
sya00G21100
Synedra acus
7.7e-13
77.0
247
50.6
YNL189W
Saccharomyces cerevisiae strain S288C
1.0e-12
76.6
86
48.8
Sro2493_g329210
Seminavis robusta
1.0e-12
76.6
237
40.5
AA0003G03170
Aureococcus anophagefferens
2.9e-12
75.1
236
28.8
Ec-19_000990
Ectocarpus siliculosus
8.5e-12
73.6
214
28.5
ps00G36350
Pseudo-nitzschia multiseries
1.5e-11
72.8
171
32.2
gene6597
Fragilariopsis cylindrus
2.5e-11
72.0
155
33.5
ptri97330
Phaeodactylum tricornutum
2.5e-11
72.0
122
38.5
gene17662
Fragilariopsis cylindrus
9.4e-11
70.1
174
31.0
fso100360
Fistulifera solaris
1.6e-10
69.3
75
41.3
ps00G02660
Pseudo-nitzschia multiseries
1.6e-10
69.3
265
26.4
FBgn0035657
Drosophila melanogaster
1.8e-09
65.9
208
26.4
gsu123810
Galdieria sulphuraria
1.8e-09
65.9
123
39.8
tps117000
Thalassiosira pseudonana
1.8e-09
65.9
119
36.1
Sro513_g157860
Seminavis robusta
4.0e-09
64.7
83
43.4
pte68710
Paramecium tetraurelia
8.2e-07
57.0
117
30.8
pte100560
Paramecium tetraurelia
1.8e-06
55.8
106
30.2
pte236600
Paramecium tetraurelia
1.8e-06
55.8
213
21.1
emh65920
Emiliania huxleyi
2.4e-06
55.5
70
44.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (8 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing