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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G36060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G36060
Arabidopsis thaliana
1.0e-84
313.9
147
100.0
AT3G52560
Arabidopsis thaliana
3.4e-75
282.3
165
82.4
Pp3c26_3910
Physcomitrella patens
5.0e-63
241.9
143
79.0
Pp3c4_23750
Physcomitrella patens
2.5e-62
239.6
143
78.3
AT1G23260
Arabidopsis thaliana
7.5e-59
228.0
137
75.9
Pp3c7_5550
Physcomitrella patens
8.3e-58
224.6
135
78.5
AT1G70660
Arabidopsis thaliana
1.4e-57
223.8
135
76.3
AT1G70650
Arabidopsis thaliana
5.4e-57
221.9
137
73.7
Cre05.g247600
Chlamydomonas reinhardtii
2.7e-48
193.0
140
62.1
gsu19970
Galdieria sulphuraria
5.2e-44
178.7
137
59.9
Ec-17_002730
Ectocarpus siliculosus
2.0e-43
176.8
147
54.4
ccr172480
Chondrus crispus
1.3e-42
174.1
141
58.2
CM16G01790
Cyanidioschyzon merolae
4.1e-41
169.1
143
55.2
SPCC338.05c
Schizosaccharomyces pombe
7.1e-41
168.3
138
57.2
FBgn0035601
Drosophila melanogaster
3.0e-39
162.9
143
48.3
pte247830
Paramecium tetraurelia
3.0e-39
162.9
137
54.7
ENSG00000124208
Homo sapiens
5.1e-39
162.2
137
54.0
ENSG00000244687
Homo sapiens
6.6e-39
161.8
135
54.8
pte143280
Paramecium tetraurelia
1.1e-38
161.0
137
54.0
tps162420
Thalassiosira pseudonana
2.8e-37
156.4
145
50.3
YGL087C
Saccharomyces cerevisiae strain S288C
6.2e-37
155.2
137
55.5
gene10878
Fragilariopsis cylindrus
1.1e-36
154.5
143
46.9
sya00G152750
Synedra acus
1.4e-36
154.1
143
47.6
sya00G152770
Synedra acus
1.4e-36
154.1
143
47.6
sya00G152810
Synedra acus
1.4e-36
154.1
143
47.6
Sro2191_g318370
Seminavis robusta
1.8e-36
153.7
143
49.0
Naga_100048g18
Nannochloropsis gaditana
8.9e-36
151.4
139
48.2
ps00G178610
Pseudo-nitzschia multiseries
7.6e-35
148.3
142
45.8
fso40380
Fistulifera solaris
9.9e-35
147.9
143
46.9
ptri139610
Phaeodactylum tricornutum
1.3e-34
147.5
143
46.2
WBGene00006730
Caenorhabditis elegans
6.4e-34
145.2
140
47.9
emh540350
Emiliania huxleyi
4.3e-30
132.5
143
44.8
CC00G109680
Cyclotella cryptica
2.5e-14
80.1
57
57.9
AA0003G04350
Aureococcus anophagefferens
2.2e-10
67.0
72
41.7
CM07G01360
Cyanidioschyzon merolae
2.5e-06
53.5
105
31.4
FBgn0004436
Drosophila melanogaster
4.3e-06
52.8
116
28.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing