Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G29680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G29680
Arabidopsis thaliana
4.8e-305
1047.7
540
100.0
AT1G07270
Arabidopsis thaliana
4.1e-195
682.6
547
68.2
Pp3c2_14050
Physcomitrella patens
2.8e-111
404.1
460
47.4
ENSG00000094804
Homo sapiens
1.6e-37
159.1
431
29.0
FBgn0035918
Drosophila melanogaster
2.9e-31
138.3
427
25.8
ENSG00000085840
Homo sapiens
2.4e-30
135.2
412
25.7
SPBC14C8.07c
Schizosaccharomyces pombe
7.8e-29
130.2
463
25.7
YJL194W
Saccharomyces cerevisiae strain S288C
3.3e-27
124.8
503
24.7
Ec-04_006400
Ectocarpus siliculosus
9.6e-27
123.2
449
24.3
ccr76820
Chondrus crispus
1.4e-25
119.4
390
28.2
AT4G14700
Arabidopsis thaliana
2.6e-24
115.2
429
24.9
Ec-19_002950
Ectocarpus siliculosus
2.6e-24
115.2
463
25.5
Pp3c9_1080
Physcomitrella patens
2.6e-24
115.2
445
25.4
AT4G12620
Arabidopsis thaliana
9.9e-24
113.2
429
25.2
FBgn0022772
Drosophila melanogaster
9.9e-24
113.2
421
24.0
SPBC29A10.15
Schizosaccharomyces pombe
2.4e-22
108.6
428
24.8
Cre10.g455600
Chlamydomonas reinhardtii
7.1e-22
107.1
427
26.9
emh543520
Emiliania huxleyi
3.5e-21
104.8
280
31.8
ccr137600
Chondrus crispus
6.0e-21
104.0
444
25.0
WBGene00012650
Caenorhabditis elegans
5.6e-19
97.4
446
23.1
CM19G01120
Cyanidioschyzon merolae
9.6e-19
96.7
364
26.9
CC00G128650
Cyclotella cryptica
1.6e-18
95.9
494
24.1
emh305820
Emiliania huxleyi
2.1e-18
95.5
386
25.4
emh587490
Emiliania huxleyi
3.6e-18
94.7
386
25.4
gsu16090
Galdieria sulphuraria
5.3e-17
90.9
448
23.7
gsu44760
Galdieria sulphuraria
8.4e-15
83.6
428
24.1
tho352360
Thalassiosira oceanica
1.4e-14
82.8
504
21.4
fso05250
Fistulifera solaris
9.3e-14
80.1
406
22.2
CM05G00820
Cyanidioschyzon merolae
1.2e-13
79.7
430
24.0
WBGene00000382
Caenorhabditis elegans
2.7e-13
78.6
350
24.3
tho123460
Thalassiosira oceanica
3.5e-13
78.2
420
22.1
Sro992_g228860
Seminavis robusta
1.3e-12
76.3
379
21.6
tho98200
Thalassiosira oceanica
1.3e-12
76.3
457
22.5
Cre06.g292850
Chlamydomonas reinhardtii
3.0e-12
75.1
208
29.8
pte308340
Paramecium tetraurelia
3.0e-12
75.1
321
24.9
YML065W
Saccharomyces cerevisiae strain S288C
3.0e-12
75.1
295
26.1
tps06190
Thalassiosira pseudonana
5.1e-12
74.3
419
22.4
sya00G191700
Synedra acus
8.7e-12
73.6
273
24.5
fso104310
Fistulifera solaris
1.1e-11
73.2
440
23.2
ps00G105730
Pseudo-nitzschia multiseries
1.5e-11
72.8
392
24.0
pte188780
Paramecium tetraurelia
1.5e-11
72.8
295
26.1
Naga_100811g4
Nannochloropsis gaditana
1.9e-11
72.4
261
25.3
pte302880
Paramecium tetraurelia
1.9e-11
72.4
409
21.8
tho282480
Thalassiosira oceanica
1.9e-11
72.4
240
25.8
tps162520
Thalassiosira pseudonana
1.9e-11
72.4
411
22.6
pte420250
Paramecium tetraurelia
1.3e-10
69.7
459
21.4
ptri153720
Phaeodactylum tricornutum
1.6e-10
69.3
400
20.2
CC00G119650
Cyclotella cryptica
2.1e-10
68.9
367
22.9
tho354400
Thalassiosira oceanica
1.4e-09
66.2
459
23.5
gene1353
Fragilariopsis cylindrus
1.8e-09
65.9
311
23.5
tps09600
Thalassiosira pseudonana
6.9e-09
63.9
364
24.2
PSNMU-V1.4_AUG-EV-PASAV3_0125120
Pseudo-nitzschia multistriata
2.6e-08
62.0
370
22.7
gene10234
Fragilariopsis cylindrus
1.3e-07
59.7
446
23.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing