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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G24490
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G24490
Arabidopsis thaliana
1.1e-156
553.9
280
100.0
AT3G02920
Arabidopsis thaliana
3.2e-42
173.7
297
36.4
Pp3c26_14310
Physcomitrella patens
4.6e-41
169.9
272
37.1
AA0035G00270
Aureococcus anophagefferens
1.2e-25
118.6
244
29.1
tho315500
Thalassiosira oceanica
2.4e-21
104.4
255
27.1
ENSG00000117748
Homo sapiens
9.1e-21
102.4
288
28.1
tps153290
Thalassiosira pseudonana
1.2e-20
102.1
289
27.3
SPCC1753.01c
Schizosaccharomyces pombe
1.7e-19
98.2
285
30.2
ps00G166880
Pseudo-nitzschia multiseries
2.9e-19
97.4
252
29.0
fso107150
Fistulifera solaris
1.6e-17
91.7
247
29.1
Sro461_g147680
Seminavis robusta
1.6e-17
91.7
249
25.7
CC00G89480
Cyclotella cryptica
3.6e-17
90.5
295
25.1
fso194160
Fistulifera solaris
1.4e-16
88.6
248
29.0
YNL312W
Saccharomyces cerevisiae strain S288C
7.4e-15
82.8
290
26.2
emh679690
Emiliania huxleyi
9.7e-15
82.4
130
33.8
emh258990
Emiliania huxleyi
9.7e-15
82.4
130
33.8
Ec-06_004810
Ectocarpus siliculosus
2.2e-14
81.3
261
26.1
Naga_100058g23
Nannochloropsis gaditana
2.2e-14
81.3
246
23.6
gene18442
Fragilariopsis cylindrus
1.5e-12
75.1
134
32.1
FBgn0032906
Drosophila melanogaster
2.6e-12
74.3
258
23.6
ptri208360
Phaeodactylum tricornutum
2.6e-12
74.3
248
23.4
Cre02.g100000
Chlamydomonas reinhardtii
1.7e-11
71.6
159
30.8
WBGene00019767
Caenorhabditis elegans
2.0e-07
58.2
250
25.6
Pp3c1_6180
Physcomitrella patens
3.7e-06
53.9
114
31.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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