Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G06510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G06510
Arabidopsis thaliana
0.0e+00
1269.2
641
100.0
Pp3c23_16880
Physcomitrella patens
3.4e-196
686.4
698
51.3
Pp3c20_10450
Physcomitrella patens
4.4e-196
686.0
697
50.4
AT4G19130
Arabidopsis thaliana
1.1e-183
644.8
672
48.5
AT5G45400
Arabidopsis thaliana
8.6e-176
618.6
745
44.0
Cre17.g718850
Chlamydomonas reinhardtii
4.5e-100
367.1
466
40.3
ENSG00000132383
Homo sapiens
1.0e-99
365.9
632
35.4
Naga_100067g7
Nannochloropsis gaditana
3.2e-98
360.9
641
33.4
AT5G61000
Arabidopsis thaliana
1.8e-88
328.6
652
32.8
AT5G08020
Arabidopsis thaliana
2.3e-88
328.2
634
32.5
gsu10940
Galdieria sulphuraria
5.7e-87
323.6
673
32.8
FBgn0010173
Drosophila melanogaster
7.5e-87
323.2
645
32.9
YAR007C
Saccharomyces cerevisiae strain S288C
3.5e-84
314.3
610
30.5
SPBC660.13c
Schizosaccharomyces pombe
1.1e-82
309.3
647
30.6
Sro773_g200410
Seminavis robusta
1.0e-80
302.8
658
33.7
fso181940
Fistulifera solaris
1.4e-80
302.4
652
33.4
fso41110
Fistulifera solaris
9.8e-79
296.2
658
33.3
CC00G33490
Cyclotella cryptica
1.7e-78
295.4
659
30.3
Pp3c1_20770
Physcomitrella patens
3.7e-78
294.3
449
35.9
tps198210
Thalassiosira pseudonana
3.7e-78
294.3
627
31.4
ptri80280
Phaeodactylum tricornutum
1.1e-77
292.7
643
30.8
sya00G127980
Synedra acus
9.2e-77
289.7
648
30.6
ccr116080
Chondrus crispus
5.9e-76
287.0
655
30.5
ps00G126120
Pseudo-nitzschia multiseries
7.8e-76
286.6
656
31.7
CM03G01230
Cyanidioschyzon merolae
3.8e-75
284.3
670
31.3
Sro944_g222890
Seminavis robusta
3.8e-75
284.3
658
32.4
sya00G143960
Synedra acus
8.6e-75
283.1
646
29.7
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
1.1e-74
282.7
659
30.3
gene3215
Fragilariopsis cylindrus
1.2e-73
279.3
650
30.9
AA0015G00520
Aureococcus anophagefferens
3.2e-69
264.6
638
31.2
gene19869
Fragilariopsis cylindrus
3.5e-60
234.6
652
27.9
emh418280
Emiliania huxleyi
1.8e-56
222.2
658
27.5
emh82610
Emiliania huxleyi
2.3e-56
221.9
658
27.5
AA0022G00030
Aureococcus anophagefferens
1.5e-55
219.2
375
33.3
tho401580
Thalassiosira oceanica
7.5e-55
216.9
449
29.6
emh244200
Emiliania huxleyi
1.0e-51
206.5
454
30.2
WBGene00017546
Caenorhabditis elegans
1.9e-45
185.7
644
26.1
Cre16.g651000
Chlamydomonas reinhardtii
1.3e-43
179.5
649
24.5
pte565200
Paramecium tetraurelia
8.7e-35
150.2
443
24.4
pte570770
Paramecium tetraurelia
8.1e-33
143.7
424
24.1
pte321820
Paramecium tetraurelia
9.0e-24
113.6
447
24.2
WBGene00019858
Caenorhabditis elegans
1.3e-11
73.2
223
27.4
AA0003G02890
Aureococcus anophagefferens
8.2e-09
63.9
118
31.4
emh278560
Emiliania huxleyi
9.0e-08
60.5
89
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing