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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT2G01120
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT2G01120
Arabidopsis thaliana
1.3e-236
820.1
425
100.0
Pp3c16_11150
Physcomitrella patens
3.9e-92
340.1
432
45.6
ENSG00000115947
Homo sapiens
9.2e-41
169.5
387
30.7
FBgn0023181
Drosophila melanogaster
2.3e-36
154.8
417
30.0
SPBP23A10.13
Schizosaccharomyces pombe
2.0e-35
151.8
385
32.5
Cre17.g726500
Chlamydomonas reinhardtii
1.2e-19
99.4
128
44.5
emh618420
Emiliania huxleyi
8.6e-15
83.2
321
30.5
emh406880
Emiliania huxleyi
8.6e-15
83.2
321
30.5
YPR162C
Saccharomyces cerevisiae strain S288C
3.1e-12
74.7
341
24.6
gsu35550
Galdieria sulphuraria
6.8e-12
73.6
383
24.3
gsu35570
Galdieria sulphuraria
6.4e-10
67.0
352
23.6
Ec-14_001730
Ectocarpus siliculosus
5.4e-09
63.9
139
30.9
Naga_100083g6
Nannochloropsis gaditana
1.6e-08
62.4
366
23.8
sya00G110430
Synedra acus
2.7e-08
61.6
175
30.9
ps00G02930
Pseudo-nitzschia multiseries
7.3e-06
53.5
152
26.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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