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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G77680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G77680
Arabidopsis thaliana
0.0e+00
2110.5
1056
100.0
Pp3c2_21290
Physcomitrella patens
9.1e-207
722.2
1205
37.0
Cre03.g208100
Chlamydomonas reinhardtii
1.8e-125
452.2
859
33.6
ENSG00000144535
Homo sapiens
1.4e-122
442.6
832
35.1
SPAC2C4.07c
Schizosaccharomyces pombe
3.8e-104
381.3
820
30.7
Ec-27_004230
Ectocarpus siliculosus
1.2e-102
376.3
849
31.8
WBGene00018612
Caenorhabditis elegans
7.2e-95
350.5
837
30.6
ptri154850
Phaeodactylum tricornutum
2.4e-82
308.9
584
34.9
Pp3c16_17530
Physcomitrella patens
5.4e-82
307.8
807
29.4
FBgn0035111
Drosophila melanogaster
2.0e-81
305.8
603
33.7
Sro545_g163880
Seminavis robusta
2.5e-79
298.9
823
29.6
fso170780
Fistulifera solaris
2.1e-78
295.8
686
29.3
Naga_100269g1
Nannochloropsis gaditana
1.4e-77
293.1
514
36.0
fso203160
Fistulifera solaris
1.8e-77
292.7
814
27.1
Ec-24_000810
Ectocarpus siliculosus
2.3e-77
292.4
707
29.6
tps130940
Thalassiosira pseudonana
2.3e-77
292.4
623
31.3
CC00G97490
Cyclotella cryptica
6.8e-77
290.8
643
30.8
PSNMU-V1.4_AUG-EV-PASAV3_0007480
Pseudo-nitzschia multistriata
1.2e-76
290.0
574
33.1
FBgn0039183
Drosophila melanogaster
3.4e-76
288.5
517
33.3
pte54050
Paramecium tetraurelia
1.3e-75
286.6
461
36.4
AT2G17510
Arabidopsis thaliana
8.3e-75
283.9
721
30.2
gene1213
Fragilariopsis cylindrus
1.4e-74
283.1
571
31.9
ps00G52060
Pseudo-nitzschia multiseries
5.4e-74
281.2
568
32.2
ENSG00000166938
Homo sapiens
7.0e-74
280.8
687
30.1
pte147690
Paramecium tetraurelia
7.0e-74
280.8
640
30.3
fso143300
Fistulifera solaris
1.2e-73
280.0
680
29.0
ENSG00000083520
Homo sapiens
4.5e-73
278.1
576
30.7
AA0007G00960
Aureococcus anophagefferens
5.9e-73
277.7
639
32.7
fso44550
Fistulifera solaris
1.7e-72
276.2
568
31.2
pte233920
Paramecium tetraurelia
5.6e-71
271.2
545
31.9
gsu64190
Galdieria sulphuraria
2.1e-70
269.2
511
35.2
ptri36920
Phaeodactylum tricornutum
2.1e-70
269.2
689
27.6
Sro137_g064550
Seminavis robusta
2.1e-70
269.2
467
34.9
tps110940
Thalassiosira pseudonana
3.6e-70
268.5
695
29.1
sya00G109270
Synedra acus
6.1e-70
267.7
543
31.7
gene13302
Fragilariopsis cylindrus
1.4e-69
266.5
800
28.1
PSNMU-V1.4_AUG-EV-PASAV3_0000990
Pseudo-nitzschia multistriata
4.0e-69
265.0
519
34.3
ps00G57140
Pseudo-nitzschia multiseries
5.2e-69
264.6
419
37.2
CC00G155430
Cyclotella cryptica
8.9e-69
263.8
646
29.1
ccr98100
Chondrus crispus
1.2e-68
263.5
419
37.9
emh558100
Emiliania huxleyi
2.9e-67
258.8
438
36.8
WBGene00001001
Caenorhabditis elegans
1.8e-66
256.1
456
35.5
tho242460
Thalassiosira oceanica
1.6e-65
253.1
381
39.4
CM01G01400
Cyanidioschyzon merolae
3.5e-65
251.9
727
29.6
YOL021C
Saccharomyces cerevisiae strain S288C
4.3e-63
245.0
444
35.4
tho186420
Thalassiosira oceanica
5.6e-63
244.6
630
29.5
SPBC26H8.10
Schizosaccharomyces pombe
9.5e-63
243.8
504
33.5
ps00G144990
Pseudo-nitzschia multiseries
1.2e-62
243.4
520
31.3
Sro443_g144170
Seminavis robusta
2.1e-62
242.7
481
32.0
sya00G193700
Synedra acus
2.8e-62
242.3
1058
25.3
sya00G219370
Synedra acus
1.8e-61
239.6
480
31.0
PSNMU-V1.4_AUG-EV-PASAV3_0026480
Pseudo-nitzschia multistriata
1.2e-60
236.9
523
30.2
Ec-05_003410
Ectocarpus siliculosus
5.8e-60
234.6
549
30.6
gene558
Fragilariopsis cylindrus
8.3e-59
230.7
520
30.0
CM09G01070
Cyanidioschyzon merolae
2.4e-58
229.2
812
29.1
ptri67240
Phaeodactylum tricornutum
1.1e-50
203.8
633
26.5
Cre12.g507250
Chlamydomonas reinhardtii
6.6e-48
194.5
536
27.8
gsu101390
Galdieria sulphuraria
7.3e-47
191.0
469
30.7
sya00G190630
Synedra acus
1.5e-44
183.3
501
27.3
emh491110
Emiliania huxleyi
7.6e-36
154.5
436
28.0
ENSG00000130589
Homo sapiens
5.6e-31
138.3
544
26.8
YDR293C
Saccharomyces cerevisiae strain S288C
1.3e-30
137.1
490
25.1
emh457300
Emiliania huxleyi
3.8e-27
125.6
347
27.1
SPBC609.01
Schizosaccharomyces pombe
3.8e-27
125.6
816
22.8
SPCC16C4.09
Schizosaccharomyces pombe
4.9e-27
125.2
743
22.7
sya00G146750
Synedra acus
1.1e-26
124.0
360
28.6
emh33190
Emiliania huxleyi
5.3e-21
105.1
147
42.9
Pp3c14_20610
Physcomitrella patens
2.4e-18
96.3
351
25.9
AT5G02250
Arabidopsis thaliana
2.7e-17
92.8
361
27.7
Cre14.g613850
Chlamydomonas reinhardtii
2.5e-15
86.3
245
29.0
ptri208500
Phaeodactylum tricornutum
7.4e-15
84.7
402
23.6
Ec-04_005440
Ectocarpus siliculosus
3.7e-14
82.4
153
34.6
fso60320
Fistulifera solaris
3.7e-14
82.4
387
24.0
PSNMU-V1.4_AUG-EV-PASAV3_0079580
Pseudo-nitzschia multistriata
4.8e-14
82.0
380
24.2
sya00G178560
Synedra acus
4.8e-14
82.0
200
29.5
Cre12.g500650
Chlamydomonas reinhardtii
8.1e-14
81.3
134
33.6
sya00G30090
Synedra acus
1.8e-13
80.1
133
36.8
Sro142_g066190
Seminavis robusta
2.4e-13
79.7
198
28.8
fso106780
Fistulifera solaris
4.0e-13
79.0
389
23.1
gsu65200
Galdieria sulphuraria
9.0e-13
77.8
235
28.9
ps00G131070
Pseudo-nitzschia multiseries
2.0e-12
76.6
393
22.4
gene20585
Fragilariopsis cylindrus
5.8e-12
75.1
146
32.2
sya00G70880
Synedra acus
2.7e-09
66.2
182
29.1
CC00G67850
Cyclotella cryptica
4.6e-09
65.5
399
24.6
YMR287C
Saccharomyces cerevisiae strain S288C
7.9e-09
64.7
403
24.3
SPCC1322.01
Schizosaccharomyces pombe
7.9e-09
64.7
389
22.6
tps106400
Thalassiosira pseudonana
5.7e-07
58.5
399
23.6
gene4108
Fragilariopsis cylindrus
9.6e-07
57.8
108
36.1
emh438140
Emiliania huxleyi
2.8e-06
56.2
139
30.9
tho345220
Thalassiosira oceanica
6.3e-06
55.1
82
35.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (8 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing