Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G73980
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G73980
Arabidopsis thaliana
0.0e+00
1234.9
644
100.0
AT1G26190
Arabidopsis thaliana
1.2e-225
784.3
666
61.6
Cre13.g590300
Chlamydomonas reinhardtii
6.5e-131
469.5
458
54.1
Pp3c20_690
Physcomitrella patens
1.8e-64
248.8
396
35.6
AT2G01460
Arabidopsis thaliana
1.2e-52
209.5
369
32.0
Pp3s92_20
Physcomitrella patens
9.3e-21
103.6
201
32.8
fso102030
Fistulifera solaris
2.7e-20
102.1
190
33.2
fso192690
Fistulifera solaris
4.6e-20
101.3
190
33.2
ENSG00000198276
Homo sapiens
1.1e-18
96.7
181
32.0
emh592050
Emiliania huxleyi
3.3e-18
95.1
185
33.0
emh271330
Emiliania huxleyi
3.3e-18
95.1
185
33.0
Pp3c18_8810
Physcomitrella patens
7.4e-18
94.0
177
29.4
AT5G40870
Arabidopsis thaliana
1.7e-17
92.8
179
29.6
SPCC162.11c
Schizosaccharomyces pombe
3.7e-17
91.7
174
33.3
AT1G55810
Arabidopsis thaliana
1.4e-16
89.7
179
30.7
FBgn0022029
Drosophila melanogaster
1.4e-16
89.7
252
25.8
WBGene00008948
Caenorhabditis elegans
2.4e-16
89.0
179
30.2
CM05G01920
Cyanidioschyzon merolae
2.4e-16
89.0
179
31.8
AT3G27190
Arabidopsis thaliana
3.1e-16
88.6
179
28.5
ccr68880
Chondrus crispus
6.9e-16
87.4
180
28.9
Pp3c9_5950
Physcomitrella patens
1.2e-15
86.7
177
27.7
AT3G27440
Arabidopsis thaliana
1.5e-15
86.3
179
28.5
pte756880
Paramecium tetraurelia
1.5e-15
86.3
182
29.7
Cre13.g573800
Chlamydomonas reinhardtii
2.6e-15
85.5
179
27.9
AA0002G06710
Aureococcus anophagefferens
3.4e-15
85.1
183
33.3
ENSG00000143179
Homo sapiens
3.4e-15
85.1
188
29.8
Pp3c22_13790
Physcomitrella patens
5.9e-15
84.3
177
27.7
Pp3c15_5700
Physcomitrella patens
7.7e-15
84.0
177
26.6
AT4G26510
Arabidopsis thaliana
1.7e-14
82.8
179
30.2
Pp3c21_7820
Physcomitrella patens
2.9e-14
82.0
126
34.1
Cre16.g681850
Chlamydomonas reinhardtii
3.8e-14
81.6
186
26.3
ps00G145430
Pseudo-nitzschia multiseries
6.5e-14
80.9
181
30.4
pte763050
Paramecium tetraurelia
1.4e-13
79.7
214
26.2
pte442120
Paramecium tetraurelia
1.9e-13
79.3
182
29.1
gene5839
Fragilariopsis cylindrus
1.6e-12
76.3
181
29.3
WBGene00007089
Caenorhabditis elegans
2.7e-12
75.5
190
28.4
Sro692_g188060
Seminavis robusta
2.7e-12
75.5
138
29.7
ENSG00000130717
Homo sapiens
7.9e-12
73.9
128
35.2
FBgn0263398
Drosophila melanogaster
4.8e-09
64.7
188
23.9
ptri193520
Phaeodactylum tricornutum
6.3e-09
64.3
200
26.0
Pp3c18_7120
Physcomitrella patens
8.2e-09
63.9
209
23.0
fso55600
Fistulifera solaris
1.4e-08
63.2
199
23.6
fso88730
Fistulifera solaris
1.4e-08
63.2
199
23.6
sya00G66190
Synedra acus
4.1e-08
61.6
200
23.5
sya00G66200
Synedra acus
4.1e-08
61.6
200
23.5
sya00G66210
Synedra acus
4.1e-08
61.6
200
23.5
Cre12.g554800
Chlamydomonas reinhardtii
2.0e-07
59.3
198
23.2
PSNMU-V1.4_AUG-EV-PASAV3_0095880
Pseudo-nitzschia multistriata
3.4e-07
58.5
130
30.8
Pp3c21_14450
Physcomitrella patens
4.5e-07
58.2
125
27.2
Pp3c19_14070
Physcomitrella patens
7.7e-07
57.4
125
26.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing