Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G73950
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G73950
Arabidopsis thaliana
1.5e-278
959.5
467
100.0
AT1G18470
Arabidopsis thaliana
3.5e-235
815.5
468
83.3
AT1G68820
Arabidopsis thaliana
1.5e-182
640.6
470
67.2
Pp3c14_8800
Physcomitrella patens
3.3e-153
543.1
429
61.8
AT4G39050
Arabidopsis thaliana
2.7e-09
65.1
92
39.1
ENSG00000023445
Homo sapiens
2.3e-08
62.0
53
43.4
AT2G21380
Arabidopsis thaliana
3.0e-08
61.6
44
52.3
ENSG00000110330
Homo sapiens
4.3e-07
57.8
49
44.9
ENSG00000101966
Homo sapiens
4.3e-07
57.8
69
36.2
ENSG00000163098
Homo sapiens
5.6e-07
57.4
59
39.0
pte03180
Paramecium tetraurelia
5.6e-07
57.4
47
44.7
pte425450
Paramecium tetraurelia
5.6e-07
57.4
47
44.7
Ec-01_004960
Ectocarpus siliculosus
7.3e-07
57.0
76
42.1
pte654310
Paramecium tetraurelia
9.5e-07
56.6
53
45.3
AT5G23110
Arabidopsis thaliana
1.2e-06
56.2
81
33.3
pte174030
Paramecium tetraurelia
1.2e-06
56.2
70
32.9
AT2G35330
Arabidopsis thaliana
2.8e-06
55.1
61
39.3
pte154230
Paramecium tetraurelia
2.8e-06
55.1
64
35.9
pte199710
Paramecium tetraurelia
2.8e-06
55.1
70
31.4
pte325170
Paramecium tetraurelia
3.6e-06
54.7
72
41.7
Pp3c9_15860
Physcomitrella patens
4.7e-06
54.3
80
37.5
CC00G78970
Cyclotella cryptica
6.2e-06
53.9
55
40.0
tho91380
Thalassiosira oceanica
6.2e-06
53.9
50
46.0
WBGene00019649
Caenorhabditis elegans
8.0e-06
53.5
96
30.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing