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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G48100
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G48100
Arabidopsis thaliana
4.0e-263
908.3
476
100.0
AT1G02460
Arabidopsis thaliana
1.3e-147
524.6
390
60.5
AT1G56710
Arabidopsis thaliana
6.7e-141
502.3
388
57.7
AT4G01890
Arabidopsis thaliana
9.7e-124
445.3
386
52.8
Pp3c18_2210
Physcomitrella patens
6.5e-112
406.0
403
48.6
AT5G14650
Arabidopsis thaliana
2.0e-105
384.4
398
47.0
AT1G10640
Arabidopsis thaliana
5.2e-101
369.8
407
45.7
AT1G60590
Arabidopsis thaliana
3.4e-100
367.1
409
45.5
AT3G26610
Arabidopsis thaliana
5.9e-89
329.7
381
43.8
AT1G80170
Arabidopsis thaliana
3.3e-87
323.9
393
41.5
AT1G70500
Arabidopsis thaliana
1.8e-85
318.2
380
41.1
AT1G23460
Arabidopsis thaliana
5.2e-85
316.6
380
41.1
Pp3c15_15300
Physcomitrella patens
3.4e-76
287.3
397
38.8
AT2G41850
Arabidopsis thaliana
4.1e-74
280.4
350
40.3
AT3G07970
Arabidopsis thaliana
1.6e-73
278.5
368
39.7
Pp3c23_3890
Physcomitrella patens
2.6e-68
261.2
380
37.6
AT3G15720
Arabidopsis thaliana
4.1e-66
253.8
387
37.7
AT1G80140
Arabidopsis thaliana
9.5e-63
242.7
349
36.4
AT4G35670
Arabidopsis thaliana
4.7e-62
240.4
356
34.0
AT2G43870
Arabidopsis thaliana
8.1e-62
239.6
351
37.6
AT2G43890
Arabidopsis thaliana
5.8e-60
233.4
350
37.4
AT1G05650
Arabidopsis thaliana
9.9e-60
232.6
382
35.3
AT5G27530
Arabidopsis thaliana
9.9e-60
232.6
361
34.6
AT1G02790
Arabidopsis thaliana
4.9e-59
230.3
351
36.2
AT1G05660
Arabidopsis thaliana
1.4e-58
228.8
382
34.3
AT2G33160
Arabidopsis thaliana
3.2e-58
227.6
357
37.0
AT2G43880
Arabidopsis thaliana
3.2e-58
227.6
376
33.5
AT1G65570
Arabidopsis thaliana
4.1e-58
227.3
383
36.0
AT3G59850
Arabidopsis thaliana
9.2e-58
226.1
352
35.8
AT3G07850
Arabidopsis thaliana
7.8e-57
223.0
348
37.1
AT3G14040
Arabidopsis thaliana
2.3e-56
221.5
341
37.5
AT5G44840
Arabidopsis thaliana
3.0e-56
221.1
375
32.0
AT1G17150
Arabidopsis thaliana
5.6e-55
216.9
383
34.7
AT5G17200
Arabidopsis thaliana
5.6e-55
216.9
401
32.9
AT2G43860
Arabidopsis thaliana
2.1e-54
214.9
354
37.3
AT1G78400
Arabidopsis thaliana
4.7e-54
213.8
354
34.5
AT1G43080
Arabidopsis thaliana
1.8e-53
211.8
356
34.3
AT1G43090
Arabidopsis thaliana
1.8e-53
211.8
356
34.6
AT3G07830
Arabidopsis thaliana
4.0e-53
210.7
338
34.6
AT3G07840
Arabidopsis thaliana
1.5e-52
208.8
347
33.4
AT1G43100
Arabidopsis thaliana
5.8e-52
206.8
356
34.3
AT3G07820
Arabidopsis thaliana
7.6e-52
206.5
345
33.9
AT4G13760
Arabidopsis thaliana
7.6e-52
206.5
358
33.2
AT4G32375
Arabidopsis thaliana
1.7e-51
205.3
341
34.9
AT3G57510
Arabidopsis thaliana
2.2e-51
204.9
279
39.8
AT2G26620
Arabidopsis thaliana
6.4e-51
203.4
355
33.0
AT5G48140
Arabidopsis thaliana
1.4e-50
202.2
338
32.2
AT2G40310
Arabidopsis thaliana
1.9e-50
201.8
355
33.2
AT5G39910
Arabidopsis thaliana
4.2e-50
200.7
397
29.5
AT5G44830
Arabidopsis thaliana
5.4e-50
200.3
339
31.3
AT2G15460
Arabidopsis thaliana
3.5e-49
197.6
356
32.9
AT2G15450
Arabidopsis thaliana
7.8e-49
196.4
356
32.6
AT4G18180
Arabidopsis thaliana
3.9e-48
194.1
351
33.6
AT2G15470
Arabidopsis thaliana
1.5e-47
192.2
356
32.3
AT4G32370
Arabidopsis thaliana
1.8e-45
185.3
292
35.6
AT4G32380
Arabidopsis thaliana
4.9e-43
177.2
294
32.3
AA0005G00450
Aureococcus anophagefferens
1.6e-38
162.2
383
30.0
emh733530
Emiliania huxleyi
1.1e-34
149.4
373
29.2
AA0010G01810
Aureococcus anophagefferens
2.1e-22
108.6
361
27.1
YJR153W
Saccharomyces cerevisiae strain S288C
2.1e-22
108.6
226
30.5
gene6671
Fragilariopsis cylindrus
2.8e-22
108.2
389
26.0
Pp3c4_24360
Physcomitrella patens
9.0e-21
103.2
378
27.5
PSNMU-V1.4_AUG-EV-PASAV3_0112000
Pseudo-nitzschia multistriata
1.2e-20
102.8
404
25.5
AT3G42950
Arabidopsis thaliana
5.9e-20
100.5
382
28.0
AT4G33440
Arabidopsis thaliana
5.9e-20
100.5
320
27.8
AT3G62110
Arabidopsis thaliana
1.2e-17
92.8
353
25.2
ptri107340
Phaeodactylum tricornutum
2.1e-17
92.0
241
28.6
AT5G49215
Arabidopsis thaliana
2.7e-17
91.7
433
24.5
AT2G23900
Arabidopsis thaliana
3.5e-17
91.3
422
24.2
AT3G48950
Arabidopsis thaliana
7.9e-17
90.1
352
22.4
AT3G06770
Arabidopsis thaliana
8.7e-16
86.7
415
25.3
ps00G172510
Pseudo-nitzschia multiseries
5.7e-15
84.0
411
24.6
AA0006G05330
Aureococcus anophagefferens
8.2e-14
80.1
300
27.3
Pp3c23_13240
Physcomitrella patens
8.2e-14
80.1
354
26.3
AT1G19170
Arabidopsis thaliana
1.1e-13
79.7
303
26.7
Pp3c24_2470
Physcomitrella patens
1.4e-13
79.3
354
25.7
AT4G23500
Arabidopsis thaliana
1.2e-12
76.3
341
24.9
AA0013G00660
Aureococcus anophagefferens
1.6e-09
65.9
344
23.3
Pp3c19_14240
Physcomitrella patens
1.6e-09
65.9
253
28.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (62 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing