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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G47260
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G47260
Arabidopsis thaliana
8.7e-157
554.3
279
100.0
AT1G19580
Arabidopsis thaliana
9.4e-119
427.9
264
78.4
AT5G66510
Arabidopsis thaliana
4.7e-78
292.7
273
56.0
Pp3c7_4200
Physcomitrella patens
4.9e-75
282.7
266
50.0
Pp3c11_22520
Physcomitrella patens
2.3e-69
263.8
266
46.6
Pp3c4_16870
Physcomitrella patens
3.5e-65
250.0
220
55.9
CM13G00520
Cyanidioschyzon merolae
7.3e-47
189.1
254
40.2
gsu30790
Galdieria sulphuraria
9.6e-47
188.7
248
39.9
gsu91670
Galdieria sulphuraria
5.3e-45
183.0
242
40.1
PSNMU-V1.4_AUG-EV-PASAV3_0096010
Pseudo-nitzschia multistriata
1.3e-38
161.8
255
40.4
AA0003G02530
Aureococcus anophagefferens
1.4e-37
158.3
165
46.7
AA0230G00030
Aureococcus anophagefferens
1.4e-37
158.3
165
46.7
pte791750
Paramecium tetraurelia
1.5e-36
154.8
234
35.5
pte725170
Paramecium tetraurelia
9.9e-36
152.1
234
35.0
ps00G145580
Pseudo-nitzschia multiseries
8.4e-35
149.1
255
39.2
Pp3c1_7500
Physcomitrella patens
3.2e-34
147.1
194
41.2
Cre06.g293850
Chlamydomonas reinhardtii
1.2e-33
145.2
183
43.2
Sro68_g037840
Seminavis robusta
1.2e-33
145.2
255
37.6
Sro740_g195550
Seminavis robusta
7.9e-33
142.5
255
37.3
fso167070
Fistulifera solaris
2.3e-32
141.0
237
37.6
Naga_100199g6
Nannochloropsis gaditana
3.0e-32
140.6
224
36.6
emh726740
Emiliania huxleyi
1.9e-31
137.9
212
37.7
ptri147470
Phaeodactylum tricornutum
7.4e-31
136.0
225
38.2
ps00G81530
Pseudo-nitzschia multiseries
4.8e-30
133.3
202
37.1
Sro731_g194150
Seminavis robusta
1.1e-29
132.1
200
41.0
Cre09.g415850
Chlamydomonas reinhardtii
3.1e-29
130.6
263
31.9
ps00G40950
Pseudo-nitzschia multiseries
5.3e-29
129.8
174
37.4
ptri08410
Phaeodactylum tricornutum
6.9e-29
129.4
204
39.7
ptri08530
Phaeodactylum tricornutum
6.9e-29
129.4
204
39.7
sya00G77040
Synedra acus
1.5e-28
128.3
181
38.1
tho357060
Thalassiosira oceanica
3.4e-28
127.1
229
33.6
gene4461
Fragilariopsis cylindrus
2.2e-27
124.4
202
34.2
ps00G37150
Pseudo-nitzschia multiseries
2.2e-27
124.4
254
35.4
Ec-10_002770
Ectocarpus siliculosus
6.5e-27
122.9
207
35.3
ccr103560
Chondrus crispus
1.4e-26
121.7
243
32.5
gene14884
Fragilariopsis cylindrus
3.2e-26
120.6
296
31.1
Naga_100187g5
Nannochloropsis gaditana
9.3e-26
119.0
212
33.5
Sro796_g203670
Seminavis robusta
1.2e-25
118.6
190
36.8
gsu34770
Galdieria sulphuraria
2.1e-25
117.9
194
36.1
PSNMU-V1.4_AUG-EV-PASAV3_0099860
Pseudo-nitzschia multistriata
4.6e-25
116.7
287
31.0
pte777030
Paramecium tetraurelia
2.3e-24
114.4
234
29.5
sya00G83970
Synedra acus
1.1e-23
112.1
200
38.5
fso121810
Fistulifera solaris
4.3e-23
110.2
226
35.0
tps147910
Thalassiosira pseudonana
4.3e-23
110.2
253
30.8
fso23950
Fistulifera solaris
9.6e-23
109.0
170
34.7
fso79830
Fistulifera solaris
9.6e-23
109.0
290
30.0
fso198020
Fistulifera solaris
9.6e-23
109.0
170
35.3
fso122780
Fistulifera solaris
1.3e-22
108.6
253
30.8
sya00G174380
Synedra acus
2.1e-22
107.8
164
37.2
tps56830
Thalassiosira pseudonana
2.8e-22
107.5
179
40.2
gene2813
Fragilariopsis cylindrus
4.8e-22
106.7
165
39.4
CC00G42060
Cyclotella cryptica
2.4e-21
104.4
242
32.6
CC00G41180
Cyclotella cryptica
3.1e-21
104.0
238
31.1
Sro49_g028820
Seminavis robusta
3.1e-21
104.0
249
30.9
AT1G47420
Arabidopsis thaliana
3.4e-20
100.5
86
66.3
pte617140
Paramecium tetraurelia
1.7e-19
98.2
234
26.9
tho558160
Thalassiosira oceanica
1.7e-19
98.2
209
34.0
Cre12.g516450
Chlamydomonas reinhardtii
1.2e-17
92.0
207
30.0
CC00G151430
Cyclotella cryptica
2.7e-17
90.9
173
28.3
tho589540
Thalassiosira oceanica
2.3e-16
87.8
112
43.8
ptri112460
Phaeodactylum tricornutum
6.7e-16
86.3
242
28.5
AA0002G00020
Aureococcus anophagefferens
8.7e-16
85.9
153
32.0
emh676960
Emiliania huxleyi
4.3e-15
83.6
74
52.7
Pp3c7_19540
Physcomitrella patens
9.7e-15
82.4
205
28.8
AT3G48680
Arabidopsis thaliana
6.3e-14
79.7
165
31.5
pte113000
Paramecium tetraurelia
1.1e-13
79.0
179
25.1
pte474410
Paramecium tetraurelia
4.1e-13
77.0
179
24.6
AT5G63510
Arabidopsis thaliana
6.9e-13
76.3
202
29.7
Ec-07_004610
Ectocarpus siliculosus
2.0e-12
74.7
177
25.4
emh74020
Emiliania huxleyi
1.3e-11
72.0
75
46.7
pte56560
Paramecium tetraurelia
1.1e-10
68.9
192
25.5
CC00G36640
Cyclotella cryptica
3.2e-10
67.4
288
25.0
pte50390
Paramecium tetraurelia
3.2e-10
67.4
114
33.3
tps151070
Thalassiosira pseudonana
3.2e-10
67.4
116
29.3
tho76960
Thalassiosira oceanica
4.2e-10
67.0
160
26.9
emh191260
Emiliania huxleyi
1.8e-08
61.6
160
27.5
emh550290
Emiliania huxleyi
8.8e-08
59.3
153
28.1
tho286660
Thalassiosira oceanica
1.7e-06
55.1
280
23.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (8 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing