Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G34460
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G34460
Arabidopsis thaliana
6.0e-278
957.6
492
100.0
AT5G06150
Arabidopsis thaliana
2.1e-142
507.3
331
82.5
AT3G11520
Arabidopsis thaliana
4.4e-71
270.4
327
53.5
AT4G37490
Arabidopsis thaliana
3.2e-53
211.1
323
43.3
AT2G26760
Arabidopsis thaliana
1.4e-40
169.1
370
33.2
AT1G20610
Arabidopsis thaliana
3.3e-34
147.9
275
34.9
Pp3c15_21520
Physcomitrella patens
2.8e-33
144.8
361
33.0
Pp3c9_18910
Physcomitrella patens
4.8e-33
144.1
346
32.7
AT4G35620
Arabidopsis thaliana
9.9e-31
136.3
167
47.3
AT1G76310
Arabidopsis thaliana
1.9e-29
132.1
312
33.0
AT2G17620
Arabidopsis thaliana
2.7e-28
128.3
162
46.3
CC00G129960
Cyclotella cryptica
4.6e-28
127.5
294
32.0
Ec-11_004920
Ectocarpus siliculosus
1.3e-27
125.9
197
39.6
Sro70_g038790
Seminavis robusta
5.1e-27
124.0
169
40.8
fso112410
Fistulifera solaris
1.1e-26
122.9
294
33.0
tps132060
Thalassiosira pseudonana
1.5e-26
122.5
170
42.4
sya00G61550
Synedra acus
1.9e-26
122.1
169
39.6
ps00G191600
Pseudo-nitzschia multiseries
3.3e-26
121.3
169
40.2
PSNMU-V1.4_AUG-EV-PASAV3_0122920
Pseudo-nitzschia multistriata
4.3e-26
120.9
169
40.2
fso176970
Fistulifera solaris
5.6e-26
120.6
282
33.3
Ec-01_009390
Ectocarpus siliculosus
9.6e-26
119.8
169
39.6
gene16392
Fragilariopsis cylindrus
9.6e-26
119.8
169
39.6
tho120800
Thalassiosira oceanica
1.6e-25
119.0
309
32.4
sya00G154950
Synedra acus
1.1e-24
116.3
271
34.3
Sro103_g052500
Seminavis robusta
3.1e-24
114.8
186
36.6
tho478780
Thalassiosira oceanica
4.0e-24
114.4
170
41.2
Naga_100054g27
Nannochloropsis gaditana
5.3e-24
114.0
165
43.6
emh405720
Emiliania huxleyi
9.0e-24
113.2
155
42.6
AA0002G00300
Aureococcus anophagefferens
3.4e-23
111.3
167
41.9
sya00G111690
Synedra acus
1.0e-22
109.8
164
43.3
CC00G26970
Cyclotella cryptica
1.7e-22
109.0
158
38.6
CC00G129930
Cyclotella cryptica
1.7e-22
109.0
169
37.9
gsu90820
Galdieria sulphuraria
2.2e-22
108.6
165
39.4
ptri126240
Phaeodactylum tricornutum
2.2e-22
108.6
171
38.0
Cre08.g370401
Chlamydomonas reinhardtii
2.9e-22
108.2
242
36.8
Sro331_g119100
Seminavis robusta
3.8e-22
107.8
317
32.2
AA0031G00790
Aureococcus anophagefferens
6.5e-22
107.1
194
32.0
CM09G02270
Cyanidioschyzon merolae
6.5e-22
107.1
212
35.4
PSNMU-V1.4_AUG-EV-PASAV3_0100250
Pseudo-nitzschia multistriata
1.6e-20
102.4
218
34.4
Sro781_g201590
Seminavis robusta
3.5e-20
101.3
168
35.7
tho07220
Thalassiosira oceanica
1.0e-19
99.8
200
34.5
tps137160
Thalassiosira pseudonana
1.8e-19
99.0
140
39.3
ptri131110
Phaeodactylum tricornutum
6.7e-19
97.1
314
32.8
Sro251_g099220
Seminavis robusta
6.7e-19
97.1
159
37.1
AT1G16330
Arabidopsis thaliana
1.5e-18
95.9
170
35.3
ps00G108070
Pseudo-nitzschia multiseries
1.5e-18
95.9
228
32.9
ENSG00000157456
Homo sapiens
1.9e-18
95.5
243
32.5
tps132020
Thalassiosira pseudonana
1.9e-18
95.5
189
32.3
gene12906
Fragilariopsis cylindrus
3.7e-17
91.3
158
38.0
FBgn0000404
Drosophila melanogaster
6.3e-17
90.5
149
36.2
ENSG00000133101
Homo sapiens
1.1e-16
89.7
220
29.5
FBgn0000405
Drosophila melanogaster
1.4e-16
89.4
195
35.9
pte118950
Paramecium tetraurelia
2.4e-16
88.6
244
29.5
ps00G117540
Pseudo-nitzschia multiseries
4.1e-16
87.8
118
43.2
pte722140
Paramecium tetraurelia
4.1e-16
87.8
137
36.5
fso177160
Fistulifera solaris
5.3e-16
87.4
166
38.0
SPBC582.03
Schizosaccharomyces pombe
5.3e-16
87.4
171
36.3
ccr45040
Chondrus crispus
6.9e-16
87.0
126
41.3
fso18850
Fistulifera solaris
6.9e-16
87.0
166
36.7
pte788140
Paramecium tetraurelia
6.9e-16
87.0
164
34.1
AT1G47210
Arabidopsis thaliana
9.0e-16
86.7
214
31.8
ENSG00000134057
Homo sapiens
9.0e-16
86.7
152
36.2
PSNMU-V1.4_AUG-EV-PASAV3_0042380
Pseudo-nitzschia multistriata
9.0e-16
86.7
118
42.4
AT5G25380
Arabidopsis thaliana
1.2e-15
86.3
200
29.5
pte517220
Paramecium tetraurelia
1.5e-15
85.9
205
30.2
pte52610
Paramecium tetraurelia
2.0e-15
85.5
205
30.2
tho159540
Thalassiosira oceanica
2.0e-15
85.5
183
34.4
AT1G44110
Arabidopsis thaliana
2.6e-15
85.1
168
32.7
AT1G80370
Arabidopsis thaliana
2.6e-15
85.1
172
31.4
AT5G43080
Arabidopsis thaliana
2.6e-15
85.1
230
31.3
pte429170
Paramecium tetraurelia
2.6e-15
85.1
244
27.5
pte620060
Paramecium tetraurelia
2.6e-15
85.1
137
36.5
WBGene00000865
Caenorhabditis elegans
3.4e-15
84.7
213
31.0
Pp3c2_9020
Physcomitrella patens
3.4e-15
84.7
161
33.5
AT1G77390
Arabidopsis thaliana
4.5e-15
84.3
169
34.9
AT1G47220
Arabidopsis thaliana
5.9e-15
84.0
179
35.8
pte436900
Paramecium tetraurelia
1.0e-14
83.2
144
37.5
Pp3c2_8700
Physcomitrella patens
1.3e-14
82.8
192
30.7
Pp3c2_8780
Physcomitrella patens
1.3e-14
82.8
192
30.7
Cre03.g207900
Chlamydomonas reinhardtii
2.2e-14
82.0
240
27.1
gene1461
Fragilariopsis cylindrus
2.2e-14
82.0
117
42.7
Pp3c2_8770
Physcomitrella patens
6.5e-14
80.5
215
30.7
pte352350
Paramecium tetraurelia
6.5e-14
80.5
205
30.7
AT1G15570
Arabidopsis thaliana
8.5e-14
80.1
164
30.5
AT5G11300
Arabidopsis thaliana
8.5e-14
80.1
190
30.5
Pp3c17_22710
Physcomitrella patens
8.5e-14
80.1
161
34.8
pte692510
Paramecium tetraurelia
8.5e-14
80.1
160
33.1
ENSG00000147082
Homo sapiens
1.1e-13
79.7
177
32.2
Pp3c1_39100
Physcomitrella patens
1.1e-13
79.7
364
28.0
YLR210W
Saccharomyces cerevisiae strain S288C
1.4e-13
79.3
174
32.2
pte520750
Paramecium tetraurelia
1.9e-13
79.0
159
34.6
ENSG00000145386
Homo sapiens
2.5e-13
78.6
216
31.0
pte136570
Paramecium tetraurelia
2.5e-13
78.6
190
30.0
pte613940
Paramecium tetraurelia
3.2e-13
78.2
160
32.5
YDL155W
Saccharomyces cerevisiae strain S288C
7.2e-13
77.0
178
30.3
pte252790
Paramecium tetraurelia
9.4e-13
76.6
260
28.5
gene1047
Fragilariopsis cylindrus
1.6e-12
75.9
111
43.2
Pp3c1_39120
Physcomitrella patens
1.6e-12
75.9
161
31.7
Pp3c1_39040
Physcomitrella patens
1.6e-12
75.9
161
31.7
SPAPB2B4.03
Schizosaccharomyces pombe
2.1e-12
75.5
202
28.2
WBGene00000866
Caenorhabditis elegans
3.6e-12
74.7
158
29.7
pte216190
Paramecium tetraurelia
3.6e-12
74.7
139
34.5
pte760840
Paramecium tetraurelia
4.6e-12
74.3
216
29.2
AT1G47230
Arabidopsis thaliana
1.0e-11
73.2
152
29.6
emh525840
Emiliania huxleyi
1.0e-11
73.2
166
32.5
pte180580
Paramecium tetraurelia
1.4e-11
72.8
139
33.8
pte443710
Paramecium tetraurelia
1.4e-11
72.8
216
28.7
Pp3c1_38770
Physcomitrella patens
1.8e-11
72.4
161
31.7
FBgn0015625
Drosophila melanogaster
3.0e-11
71.6
205
27.8
pte688730
Paramecium tetraurelia
3.0e-11
71.6
203
28.6
WBGene00000867
Caenorhabditis elegans
3.9e-11
71.2
154
29.9
Pp3c14_23640
Physcomitrella patens
3.9e-11
71.2
162
32.1
AT5G01800
Arabidopsis thaliana
6.7e-11
70.5
111
42.3
gsu98950
Galdieria sulphuraria
6.7e-11
70.5
146
32.9
WBGene00000868
Caenorhabditis elegans
8.8e-11
70.1
177
27.7
pte372810
Paramecium tetraurelia
1.5e-10
69.3
169
29.0
pte335980
Paramecium tetraurelia
4.3e-10
67.8
169
27.8
YPR120C
Saccharomyces cerevisiae strain S288C
5.7e-10
67.4
167
31.1
Ec-01_000740
Ectocarpus siliculosus
7.4e-10
67.0
169
27.2
pte449050
Paramecium tetraurelia
2.8e-09
65.1
128
33.6
WBGene00000863
Caenorhabditis elegans
3.7e-09
64.7
156
26.9
YPR119W
Saccharomyces cerevisiae strain S288C
3.7e-09
64.7
293
25.9
YGR109C
Saccharomyces cerevisiae strain S288C
6.3e-09
63.9
162
29.0
pte678410
Paramecium tetraurelia
1.1e-08
63.2
223
24.7
CM09G02030
Cyanidioschyzon merolae
1.4e-08
62.8
170
30.0
Sro326_g118260
Seminavis robusta
2.4e-08
62.0
180
30.0
YGR108W
Saccharomyces cerevisiae strain S288C
3.1e-08
61.6
165
29.7
CC00G145970
Cyclotella cryptica
5.3e-08
60.8
137
29.9
emh541250
Emiliania huxleyi
6.9e-08
60.5
121
33.1
emh130010
Emiliania huxleyi
6.9e-08
60.5
121
33.1
Sro969_g226160
Seminavis robusta
6.9e-08
60.5
218
23.9
pte540220
Paramecium tetraurelia
1.5e-07
59.3
174
28.7
pte530190
Paramecium tetraurelia
2.0e-07
58.9
129
30.2
tps131240
Thalassiosira pseudonana
2.0e-07
58.9
59
52.5
SPCC4E9.02
Schizosaccharomyces pombe
2.6e-07
58.5
109
34.9
pte499340
Paramecium tetraurelia
3.4e-07
58.2
189
23.8
pte654950
Paramecium tetraurelia
3.4e-07
58.2
129
28.7
tps01700
Thalassiosira pseudonana
5.9e-07
57.4
137
29.2
FBgn0010382
Drosophila melanogaster
7.7e-07
57.0
121
31.4
ps00G139740
Pseudo-nitzschia multiseries
7.7e-07
57.0
140
31.4
gene17617
Fragilariopsis cylindrus
1.3e-06
56.2
126
28.6
pte601160
Paramecium tetraurelia
1.3e-06
56.2
82
36.6
sya00G05890
Synedra acus
2.9e-06
55.1
118
30.5
ENSG00000175305
Homo sapiens
5.0e-06
54.3
146
32.2
Naga_100051g13
Nannochloropsis gaditana
6.5e-06
53.9
153
29.4
pte158600
Paramecium tetraurelia
6.5e-06
53.9
112
29.5
pte794570
Paramecium tetraurelia
8.5e-06
53.5
122
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (6 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (21 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (30 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing