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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G27970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G27970
Arabidopsis thaliana
2.2e-73
276.2
135
100.0
AT1G27310
Arabidopsis thaliana
8.2e-52
204.5
118
83.9
Pp3c2_25620
Physcomitrella patens
3.4e-50
199.1
118
80.5
Pp3c7_12750
Physcomitrella patens
5.7e-45
181.8
118
73.7
Pp3c11_12220
Physcomitrella patens
1.0e-41
171.0
118
68.6
AT1G11570
Arabidopsis thaliana
3.6e-31
136.0
118
57.6
Cre07.g316000
Chlamydomonas reinhardtii
1.0e-30
134.4
117
55.6
gsu133240
Galdieria sulphuraria
2.2e-28
126.7
118
54.2
emh611570
Emiliania huxleyi
3.7e-28
125.9
113
51.3
emh255370
Emiliania huxleyi
3.7e-28
125.9
113
51.3
CM20G04500
Cyanidioschyzon merolae
4.5e-26
119.0
119
49.6
SPAC15F9.03c
Schizosaccharomyces pombe
1.3e-25
117.5
117
47.9
YER009W
Saccharomyces cerevisiae strain S288C
3.8e-25
115.9
118
46.6
tps157040
Thalassiosira pseudonana
5.0e-25
115.5
118
47.5
ccr06240
Chondrus crispus
8.5e-25
114.8
122
49.2
Sro1226_g254190
Seminavis robusta
7.2e-24
111.7
118
44.9
PSNMU-V1.4_AUG-EV-PASAV3_0083710
Pseudo-nitzschia multistriata
1.6e-23
110.5
118
44.1
fso155090
Fistulifera solaris
6.1e-23
108.6
118
46.6
CC00G142210
Cyclotella cryptica
6.7e-22
105.1
118
43.2
sya00G39070
Synedra acus
6.7e-22
105.1
118
41.5
sya00G149180
Synedra acus
6.7e-22
105.1
118
41.5
ps00G52330
Pseudo-nitzschia multiseries
1.5e-21
104.0
118
42.4
ptri43170
Phaeodactylum tricornutum
4.4e-21
102.4
118
41.5
Naga_100010g44
Nannochloropsis gaditana
4.8e-20
99.0
118
40.7
pte546800
Paramecium tetraurelia
9.1e-19
94.7
119
40.3
gene6843
Fragilariopsis cylindrus
1.6e-18
94.0
122
42.6
gene169
Fragilariopsis cylindrus
1.6e-18
94.0
122
42.6
pte469160
Paramecium tetraurelia
1.6e-18
94.0
119
40.3
pte403660
Paramecium tetraurelia
7.7e-18
91.7
113
37.2
AA0001G03000
Aureococcus anophagefferens
4.2e-16
85.9
121
41.3
ENSG00000102898
Homo sapiens
7.2e-16
85.1
115
40.9
WBGene00004305
Caenorhabditis elegans
4.7e-15
82.4
133
39.8
Ec-02_000700
Ectocarpus siliculosus
2.2e-12
73.6
120
38.3
FBgn0032680
Drosophila melanogaster
2.8e-12
73.2
116
40.5
FBgn0031145
Drosophila melanogaster
2.8e-12
73.2
116
40.5
Pp3c11_12240
Physcomitrella patens
1.6e-10
67.4
41
78.0
SPBP8B7.11
Schizosaccharomyces pombe
8.8e-06
51.6
120
35.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing