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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G23260
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G23260
Arabidopsis thaliana
1.4e-90
333.6
159
100.0
AT1G70660
Arabidopsis thaliana
6.6e-77
288.1
160
86.2
AT1G70650
Arabidopsis thaliana
1.2e-73
277.3
154
85.1
AT3G52560
Arabidopsis thaliana
2.8e-59
229.6
159
69.2
AT2G36060
Arabidopsis thaliana
5.3e-58
225.3
137
75.9
Pp3c26_3910
Physcomitrella patens
1.1e-55
217.6
135
71.9
Pp3c4_23750
Physcomitrella patens
1.4e-55
217.2
135
71.9
Pp3c7_5550
Physcomitrella patens
6.0e-54
211.8
131
72.5
Cre05.g247600
Chlamydomonas reinhardtii
1.9e-44
180.3
134
56.7
ccr172480
Chondrus crispus
6.9e-42
171.8
137
55.5
CM16G01790
Cyanidioschyzon merolae
2.6e-41
169.9
143
54.5
gsu19970
Galdieria sulphuraria
1.3e-40
167.5
132
53.8
ENSG00000244687
Homo sapiens
2.2e-40
166.8
134
54.5
ENSG00000124208
Homo sapiens
2.2e-40
166.8
134
54.5
Naga_100048g18
Nannochloropsis gaditana
1.4e-39
164.1
140
50.0
Ec-17_002730
Ectocarpus siliculosus
1.9e-39
163.7
136
51.5
FBgn0035601
Drosophila melanogaster
4.2e-39
162.5
135
49.6
YGL087C
Saccharomyces cerevisiae strain S288C
4.2e-39
162.5
132
56.8
SPCC338.05c
Schizosaccharomyces pombe
4.2e-39
162.5
133
54.1
pte143280
Paramecium tetraurelia
2.1e-38
160.2
132
55.3
pte247830
Paramecium tetraurelia
4.6e-38
159.1
132
54.5
sya00G152750
Synedra acus
2.3e-37
156.8
135
47.4
sya00G152770
Synedra acus
2.3e-37
156.8
135
47.4
sya00G152810
Synedra acus
2.3e-37
156.8
135
47.4
fso40380
Fistulifera solaris
2.2e-35
150.2
134
48.5
gene10878
Fragilariopsis cylindrus
2.8e-35
149.8
134
47.0
tps162420
Thalassiosira pseudonana
8.2e-35
148.3
135
48.9
ptri139610
Phaeodactylum tricornutum
3.1e-34
146.4
134
46.3
WBGene00006730
Caenorhabditis elegans
9.0e-34
144.8
135
48.1
Sro2191_g318370
Seminavis robusta
9.0e-34
144.8
135
45.9
ps00G178610
Pseudo-nitzschia multiseries
2.0e-33
143.7
135
44.4
emh540350
Emiliania huxleyi
5.7e-28
125.6
140
42.9
CC00G109680
Cyclotella cryptica
6.3e-11
68.9
47
61.7
AA0003G04350
Aureococcus anophagefferens
1.4e-10
67.8
72
41.7
CC00G141600
Cyclotella cryptica
3.1e-10
66.6
93
40.9
FBgn0015320
Drosophila melanogaster
1.3e-08
61.2
84
38.1
tps168390
Thalassiosira pseudonana
1.7e-08
60.8
81
39.5
ENSG00000170035
Homo sapiens
2.2e-08
60.5
84
38.1
ENSG00000170142
Homo sapiens
2.2e-08
60.5
84
39.3
ENSG00000182247
Homo sapiens
2.9e-08
60.1
84
38.1
tho203680
Thalassiosira oceanica
2.9e-08
60.1
81
37.0
pte335800
Paramecium tetraurelia
5.0e-08
59.3
83
34.9
sya00G261810
Synedra acus
5.0e-08
59.3
89
37.1
emh56920
Emiliania huxleyi
6.5e-08
58.9
140
26.4
emh734410
Emiliania huxleyi
8.5e-08
58.5
136
27.9
tho306540
Thalassiosira oceanica
8.5e-08
58.5
63
39.7
Pp3c26_5580
Physcomitrella patens
1.1e-07
58.2
108
35.2
pte155300
Paramecium tetraurelia
1.5e-07
57.8
106
32.1
Sro376_g129650
Seminavis robusta
1.5e-07
57.8
83
34.9
PSNMU-V1.4_AUG-EV-PASAV3_0013770
Pseudo-nitzschia multistriata
1.9e-07
57.4
85
35.3
AT5G25760
Arabidopsis thaliana
3.2e-07
56.6
80
37.5
gene365
Fragilariopsis cylindrus
3.2e-07
56.6
85
36.5
fso02880
Fistulifera solaris
3.2e-07
56.6
115
28.7
AT3G46460
Arabidopsis thaliana
4.2e-07
56.2
137
29.9
WBGene00006715
Caenorhabditis elegans
4.2e-07
56.2
81
35.8
Ec-16_005210
Ectocarpus siliculosus
5.5e-07
55.8
85
31.8
gsu122210
Galdieria sulphuraria
5.5e-07
55.8
126
30.2
pte276120
Paramecium tetraurelia
5.5e-07
55.8
118
32.2
AT5G59300
Arabidopsis thaliana
7.2e-07
55.5
103
31.1
fso154020
Fistulifera solaris
7.2e-07
55.5
83
36.1
ps00G71040
Pseudo-nitzschia multiseries
7.2e-07
55.5
85
34.1
sya00G25800
Synedra acus
7.2e-07
55.5
116
30.2
ccr101300
Chondrus crispus
9.4e-07
55.1
102
31.4
Cre12.g546650
Chlamydomonas reinhardtii
9.4e-07
55.1
48
47.9
sya00G244810
Synedra acus
9.4e-07
55.1
69
40.6
CM02G00150
Cyanidioschyzon merolae
1.2e-06
54.7
77
35.1
CM11G02520
Cyanidioschyzon merolae
1.2e-06
54.7
85
31.8
FBgn0027609
Drosophila melanogaster
1.6e-06
54.3
120
31.7
fso166690
Fistulifera solaris
1.6e-06
54.3
87
31.0
FBgn0058045
Drosophila melanogaster
2.1e-06
53.9
55
45.5
Pp3c1_30730
Physcomitrella patens
2.1e-06
53.9
94
31.9
Pp3c1_29770
Physcomitrella patens
2.1e-06
53.9
94
31.9
fso101370
Fistulifera solaris
2.7e-06
53.5
83
36.1
FBgn0011217
Drosophila melanogaster
3.6e-06
53.1
84
31.0
ENSG00000072401
Homo sapiens
3.6e-06
53.1
84
29.8
ptri82770
Phaeodactylum tricornutum
3.6e-06
53.1
52
42.3
WBGene00002344
Caenorhabditis elegans
4.7e-06
52.8
84
31.0
emh65860
Emiliania huxleyi
4.7e-06
52.8
73
32.9
Ec-07_001940
Ectocarpus siliculosus
4.7e-06
52.8
116
29.3
ENSG00000078140
Homo sapiens
4.7e-06
52.8
76
35.5
gene6950
Fragilariopsis cylindrus
6.1e-06
52.4
76
32.9
gene17600
Fragilariopsis cylindrus
6.1e-06
52.4
76
32.9
gsu12260
Galdieria sulphuraria
6.1e-06
52.4
84
31.0
Naga_100887g2
Nannochloropsis gaditana
6.1e-06
52.4
84
31.0
ps00G17190
Pseudo-nitzschia multiseries
6.1e-06
52.4
81
32.1
pte372670
Paramecium tetraurelia
6.1e-06
52.4
83
30.1
AA0002G05620
Aureococcus anophagefferens
8.0e-06
52.0
98
30.6
ccr189180
Chondrus crispus
8.0e-06
52.0
110
34.5
Ec-07_007090
Ectocarpus siliculosus
8.0e-06
52.0
90
34.4
ENSG00000132388
Homo sapiens
8.0e-06
52.0
55
43.6
pte272750
Paramecium tetraurelia
8.0e-06
52.0
126
31.7
YDR177W
Saccharomyces cerevisiae strain S288C
8.0e-06
52.0
100
31.0
Sro65_g036850
Seminavis robusta
8.0e-06
52.0
117
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (3 genes)
Synedra acus (6 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing