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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G18760
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G18760
Arabidopsis thaliana
6.8e-120
431.4
225
100.0
AT3G13228
Arabidopsis thaliana
5.0e-38
159.5
226
41.2
AT2G29840
Arabidopsis thaliana
3.5e-31
136.7
92
66.3
AT1G18770
Arabidopsis thaliana
4.7e-28
126.3
71
80.3
AT1G18780
Arabidopsis thaliana
2.2e-25
117.5
88
58.0
AT1G21960
Arabidopsis thaliana
3.2e-24
113.6
84
65.5
AT5G53910
Arabidopsis thaliana
6.4e-17
89.4
247
30.0
AT3G19950
Arabidopsis thaliana
2.8e-12
73.9
83
37.3
AT1G55530
Arabidopsis thaliana
2.3e-11
70.9
86
33.7
gsu120140
Galdieria sulphuraria
1.5e-10
68.2
74
40.5
gsu120160
Galdieria sulphuraria
1.5e-10
68.2
74
40.5
AT4G26400
Arabidopsis thaliana
3.4e-10
67.0
74
36.5
WBGene00023404
Caenorhabditis elegans
3.4e-10
67.0
80
41.2
AT3G13430
Arabidopsis thaliana
5.8e-10
66.2
79
36.7
gsu35890
Galdieria sulphuraria
5.8e-10
66.2
87
33.3
AT1G74620
Arabidopsis thaliana
9.9e-10
65.5
72
34.7
AT5G59550
Arabidopsis thaliana
1.3e-09
65.1
73
38.4
FBgn0038627
Drosophila melanogaster
1.7e-09
64.7
78
35.9
AT5G56340
Arabidopsis thaliana
2.2e-09
64.3
47
42.6
gsu64960
Galdieria sulphuraria
2.9e-09
63.9
81
32.1
Pp3c3_13100
Physcomitrella patens
8.3e-09
62.4
84
29.8
Ec-12_004750
Ectocarpus siliculosus
1.4e-08
61.6
49
49.0
pte706380
Paramecium tetraurelia
1.4e-08
61.6
84
31.0
AT3G58720
Arabidopsis thaliana
1.9e-08
61.2
45
46.7
AT1G68070
Arabidopsis thaliana
2.4e-08
60.8
45
42.2
Cre11.g476250
Chlamydomonas reinhardtii
2.4e-08
60.8
46
41.3
pte412900
Paramecium tetraurelia
2.4e-08
60.8
84
31.0
Naga_100130g11
Nannochloropsis gaditana
3.2e-08
60.5
91
31.9
AT5G42940
Arabidopsis thaliana
4.1e-08
60.1
64
37.5
ccr69680
Chondrus crispus
4.1e-08
60.1
73
35.6
gsu81630
Galdieria sulphuraria
5.4e-08
59.7
53
37.7
gsu81650
Galdieria sulphuraria
5.4e-08
59.7
53
37.7
AT5G54990
Arabidopsis thaliana
7.1e-08
59.3
44
47.7
Ec-24_001940
Ectocarpus siliculosus
7.1e-08
59.3
52
40.4
Pp3c11_26010
Physcomitrella patens
7.1e-08
59.3
72
34.7
pte764790
Paramecium tetraurelia
9.2e-08
58.9
51
39.2
AT1G12760
Arabidopsis thaliana
1.2e-07
58.5
45
46.7
AT3G62690
Arabidopsis thaliana
1.2e-07
58.5
72
38.9
AT5G45290
Arabidopsis thaliana
1.2e-07
58.5
75
41.3
ptri36050
Phaeodactylum tricornutum
1.2e-07
58.5
61
36.1
sya00G04050
Synedra acus
1.2e-07
58.5
82
31.7
AA0006G05410
Aureococcus anophagefferens
1.6e-07
58.2
49
42.9
sya00G122820
Synedra acus
1.6e-07
58.2
53
39.6
AT1G14200
Arabidopsis thaliana
2.1e-07
57.8
49
38.8
AT2G15580
Arabidopsis thaliana
2.1e-07
57.8
52
40.4
AT5G43420
Arabidopsis thaliana
2.1e-07
57.8
52
38.5
gene7198
Fragilariopsis cylindrus
2.1e-07
57.8
60
38.3
PSNMU-V1.4_AUG-EV-PASAV3_0068320
Pseudo-nitzschia multistriata
2.1e-07
57.8
54
42.6
pte623100
Paramecium tetraurelia
2.1e-07
57.8
79
29.1
AT2G44330
Arabidopsis thaliana
2.7e-07
57.4
46
41.3
emh651500
Emiliania huxleyi
2.7e-07
57.4
83
36.1
ENSG00000131263
Homo sapiens
2.7e-07
57.4
76
30.3
PSNMU-V1.4_AUG-EV-PASAV3_0076380
Pseudo-nitzschia multistriata
2.7e-07
57.4
50
44.0
PSNMU-V1.4_AUG-EV-PASAV3_0029140
Pseudo-nitzschia multistriata
2.7e-07
57.4
84
36.9
PSNMU-V1.4_AUG-EV-PASAV3_0023260
Pseudo-nitzschia multistriata
2.7e-07
57.4
76
34.2
pte783360
Paramecium tetraurelia
2.7e-07
57.4
79
29.1
Ec-27_004490
Ectocarpus siliculosus
3.5e-07
57.0
56
35.7
SPAC57A7.09
Schizosaccharomyces pombe
3.5e-07
57.0
47
46.8
Sro1292_g260020
Seminavis robusta
3.5e-07
57.0
45
46.7
Sro117_g057280
Seminavis robusta
3.5e-07
57.0
45
46.7
AT1G53190
Arabidopsis thaliana
4.6e-07
56.6
45
46.7
AT3G02340
Arabidopsis thaliana
4.6e-07
56.6
84
31.0
ptri29870
Phaeodactylum tricornutum
4.6e-07
56.6
53
34.0
Pp3c7_560
Physcomitrella patens
6.0e-07
56.2
72
31.9
ps00G81860
Pseudo-nitzschia multiseries
6.0e-07
56.2
54
42.6
Cre10.g422050
Chlamydomonas reinhardtii
7.8e-07
55.8
47
40.4
Pp3c9_2330
Physcomitrella patens
7.8e-07
55.8
84
31.0
ptri174090
Phaeodactylum tricornutum
7.8e-07
55.8
52
38.5
gene7079
Fragilariopsis cylindrus
1.0e-06
55.5
50
40.0
Naga_100191g7
Nannochloropsis gaditana
1.0e-06
55.5
48
45.8
ps00G17180
Pseudo-nitzschia multiseries
1.0e-06
55.5
68
39.7
AT1G49850
Arabidopsis thaliana
1.3e-06
55.1
82
32.9
AT5G24870
Arabidopsis thaliana
1.3e-06
55.1
84
29.8
emh324960
Emiliania huxleyi
1.3e-06
55.1
50
40.0
Pp3c15_2690
Physcomitrella patens
1.3e-06
55.1
45
40.0
pte129990
Paramecium tetraurelia
1.3e-06
55.1
52
36.5
pte588240
Paramecium tetraurelia
1.3e-06
55.1
52
32.7
CC00G192240
Cyclotella cryptica
1.7e-06
54.7
68
35.3
emh568340
Emiliania huxleyi
1.7e-06
54.7
74
35.1
ENSG00000239305
Homo sapiens
1.7e-06
54.7
44
45.5
tho359900
Thalassiosira oceanica
1.7e-06
54.7
41
46.3
gene7699
Fragilariopsis cylindrus
2.3e-06
54.3
46
47.8
Naga_100022g47
Nannochloropsis gaditana
2.3e-06
54.3
42
47.6
PSNMU-V1.4_AUG-EV-PASAV3_0066820
Pseudo-nitzschia multistriata
2.3e-06
54.3
46
41.3
ps00G36280
Pseudo-nitzschia multiseries
2.3e-06
54.3
57
36.8
FBgn0039150
Drosophila melanogaster
3.0e-06
53.9
45
51.1
gene854
Fragilariopsis cylindrus
3.0e-06
53.9
46
47.8
gene19138
Fragilariopsis cylindrus
3.0e-06
53.9
49
42.9
Pp3c18_7090
Physcomitrella patens
3.0e-06
53.9
85
35.3
pte663000
Paramecium tetraurelia
3.0e-06
53.9
87
32.2
ptri170720
Phaeodactylum tricornutum
3.0e-06
53.9
63
39.7
sya00G261570
Synedra acus
3.0e-06
53.9
61
37.7
Ec-06_004730
Ectocarpus siliculosus
3.9e-06
53.5
73
32.9
fso153950
Fistulifera solaris
3.9e-06
53.5
57
38.6
gsu141830
Galdieria sulphuraria
3.9e-06
53.5
48
47.9
PSNMU-V1.4_AUG-EV-PASAV3_0080940
Pseudo-nitzschia multistriata
3.9e-06
53.5
41
48.8
pte516660
Paramecium tetraurelia
3.9e-06
53.5
66
33.3
Sro2009_g310720
Seminavis robusta
3.9e-06
53.5
46
43.5
sya00G207190
Synedra acus
3.9e-06
53.5
44
43.2
tho232200
Thalassiosira oceanica
3.9e-06
53.5
53
39.6
tps152270
Thalassiosira pseudonana
3.9e-06
53.5
50
44.0
AT2G44581
Arabidopsis thaliana
5.1e-06
53.1
64
39.1
AT3G55530
Arabidopsis thaliana
5.1e-06
53.1
84
34.5
AT5G64920
Arabidopsis thaliana
5.1e-06
53.1
49
36.7
ccr153520
Chondrus crispus
5.1e-06
53.1
43
51.2
fso74690
Fistulifera solaris
5.1e-06
53.1
45
44.4
fso91140
Fistulifera solaris
5.1e-06
53.1
45
44.4
fso101440
Fistulifera solaris
5.1e-06
53.1
54
37.0
ENSG00000108523
Homo sapiens
5.1e-06
53.1
43
44.2
Naga_101076g3
Nannochloropsis gaditana
5.1e-06
53.1
45
37.8
ps00G54440
Pseudo-nitzschia multiseries
5.1e-06
53.1
40
50.0
AA0005G01700
Aureococcus anophagefferens
6.6e-06
52.8
42
42.9
AA0016G01620
Aureococcus anophagefferens
6.6e-06
52.8
51
35.3
AT1G26800
Arabidopsis thaliana
6.6e-06
52.8
83
28.9
AT2G15530
Arabidopsis thaliana
6.6e-06
52.8
66
39.4
AT2G47560
Arabidopsis thaliana
6.6e-06
52.8
43
46.5
AT3G14320
Arabidopsis thaliana
6.6e-06
52.8
43
46.5
AT5G52140
Arabidopsis thaliana
6.6e-06
52.8
51
37.3
ENSG00000082996
Homo sapiens
6.6e-06
52.8
46
43.5
Pp3c1_9560
Physcomitrella patens
6.6e-06
52.8
50
42.0
pte500980
Paramecium tetraurelia
6.6e-06
52.8
87
28.7
AT4G12210
Arabidopsis thaliana
8.6e-06
52.4
83
33.7
emh742400
Emiliania huxleyi
8.6e-06
52.4
42
40.5
gsu112370
Galdieria sulphuraria
8.6e-06
52.4
65
35.4
ENSG00000157911
Homo sapiens
8.6e-06
52.4
55
41.8
Pp3c5_22880
Physcomitrella patens
8.6e-06
52.4
60
35.0
pte676370
Paramecium tetraurelia
8.6e-06
52.4
87
26.4
tho482540
Thalassiosira oceanica
8.6e-06
52.4
43
44.2
tps88250
Thalassiosira pseudonana
8.6e-06
52.4
43
39.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (38 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (8 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing