Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G18750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G18750
Arabidopsis thaliana
7.0e-189
661.4
390
100.0
AT2G03060
Arabidopsis thaliana
3.5e-63
243.8
285
50.2
AT1G69540
Arabidopsis thaliana
8.7e-46
186.0
185
55.1
Pp3c1_39780
Physcomitrella patens
3.4e-26
120.9
287
32.1
Pp3c14_22180
Physcomitrella patens
2.5e-24
114.8
97
57.7
AT1G77980
Arabidopsis thaliana
5.5e-24
113.6
247
35.6
AT1G22130
Arabidopsis thaliana
3.5e-23
110.9
288
31.9
Pp3c8_6890
Physcomitrella patens
1.3e-20
102.4
200
35.5
Pp3c9_1370
Physcomitrella patens
1.3e-20
102.4
204
35.3
AT1G77950
Arabidopsis thaliana
3.7e-20
100.9
186
37.1
Pp3c12_22890
Physcomitrella patens
1.4e-19
99.0
119
47.9
Pp3c1_39760
Physcomitrella patens
1.4e-19
99.0
200
33.5
Pp3c8_6920
Physcomitrella patens
2.4e-19
98.2
201
33.8
Pp3c17_13070
Physcomitrella patens
5.3e-19
97.1
204
32.8
Pp3c3_31810
Physcomitrella patens
1.5e-18
95.5
79
58.2
Pp3c3_31770
Physcomitrella patens
2.6e-18
94.7
159
37.1
AT3G57390
Arabidopsis thaliana
8.8e-14
79.7
85
43.5
AT2G26320
Arabidopsis thaliana
4.3e-13
77.4
82
43.9
AT5G10140
Arabidopsis thaliana
1.7e-12
75.5
196
29.6
AT1G26310
Arabidopsis thaliana
2.2e-12
75.1
79
43.0
AT5G62165
Arabidopsis thaliana
8.2e-12
73.2
187
28.3
AT3G57230
Arabidopsis thaliana
1.1e-11
72.8
72
48.6
Pp3c4_540
Physcomitrella patens
1.1e-11
72.8
178
30.9
AT2G03710
Arabidopsis thaliana
1.8e-11
72.0
107
40.2
AT3G58780
Arabidopsis thaliana
1.8e-11
72.0
53
60.4
AT5G13790
Arabidopsis thaliana
1.8e-11
72.0
172
28.5
gsu112310
Galdieria sulphuraria
1.8e-11
72.0
107
39.3
AT1G69120
Arabidopsis thaliana
2.4e-11
71.6
79
40.5
AT2G42830
Arabidopsis thaliana
2.4e-11
71.6
53
60.4
AT4G18960
Arabidopsis thaliana
2.4e-11
71.6
52
61.5
AT5G60910
Arabidopsis thaliana
2.4e-11
71.6
71
42.3
Pp3c3_31980
Physcomitrella patens
2.4e-11
71.6
71
45.1
AT5G23260
Arabidopsis thaliana
4.1e-11
70.9
130
31.5
Pp3c17_5920
Physcomitrella patens
4.1e-11
70.9
223
27.4
AT2G14210
Arabidopsis thaliana
5.3e-11
70.5
169
29.6
AT4G09960
Arabidopsis thaliana
5.3e-11
70.5
183
29.0
AT5G65070
Arabidopsis thaliana
6.9e-11
70.1
71
46.5
AT2G45650
Arabidopsis thaliana
1.2e-10
69.3
103
38.8
WBGene00003182
Caenorhabditis elegans
1.2e-10
69.3
92
38.0
Pp3c14_14900
Physcomitrella patens
1.2e-10
69.3
177
27.1
Pp3c1_30500
Physcomitrella patens
1.2e-10
69.3
215
26.0
AT3G54340
Arabidopsis thaliana
1.5e-10
68.9
92
33.7
ENSG00000064489
Homo sapiens
1.5e-10
68.9
98
38.8
ENSG00000213999
Homo sapiens
1.5e-10
68.9
98
38.8
AT1G24260
Arabidopsis thaliana
2.0e-10
68.6
64
48.4
ENSG00000116604
Homo sapiens
2.6e-10
68.2
92
37.0
ENSG00000081189
Homo sapiens
2.6e-10
68.2
92
38.0
AT5G20240
Arabidopsis thaliana
3.4e-10
67.8
149
27.5
AT3G02310
Arabidopsis thaliana
4.5e-10
67.4
180
27.8
AT4G11880
Arabidopsis thaliana
4.5e-10
67.4
104
36.5
AT4G37940
Arabidopsis thaliana
4.5e-10
67.4
71
45.1
AT5G15800
Arabidopsis thaliana
4.5e-10
67.4
180
27.8
Pp3c12_22500
Physcomitrella patens
4.5e-10
67.4
173
28.9
Pp3c25_6940
Physcomitrella patens
4.5e-10
67.4
70
47.1
AT3G61120
Arabidopsis thaliana
5.9e-10
67.0
165
30.9
AT4G22950
Arabidopsis thaliana
5.9e-10
67.0
176
31.2
AT4G24540
Arabidopsis thaliana
5.9e-10
67.0
72
41.7
AT2G45660
Arabidopsis thaliana
7.7e-10
66.6
91
40.7
ENSG00000068305
Homo sapiens
7.7e-10
66.6
92
37.0
Pp3c16_19170
Physcomitrella patens
7.7e-10
66.6
70
47.1
AT1G71692
Arabidopsis thaliana
1.0e-09
66.2
75
44.0
AT5G51860
Arabidopsis thaliana
2.2e-09
65.1
178
25.8
AT2G22630
Arabidopsis thaliana
2.9e-09
64.7
80
41.2
AT2G22540
Arabidopsis thaliana
3.8e-09
64.3
99
35.4
AT3G30260
Arabidopsis thaliana
5.0e-09
63.9
164
27.4
AT5G65080
Arabidopsis thaliana
5.0e-09
63.9
147
32.0
AT5G65050
Arabidopsis thaliana
6.5e-09
63.5
53
52.8
Pp3c13_24590
Physcomitrella patens
8.5e-09
63.2
230
25.2
AT1G47760
Arabidopsis thaliana
1.4e-08
62.4
139
27.3
AT4G36590
Arabidopsis thaliana
1.4e-08
62.4
71
42.3
AT5G51870
Arabidopsis thaliana
1.9e-08
62.0
183
26.2
AT1G01530
Arabidopsis thaliana
5.5e-08
60.5
57
43.9
AT1G77080
Arabidopsis thaliana
7.2e-08
60.1
209
27.3
AT1G65300
Arabidopsis thaliana
2.7e-07
58.2
205
24.9
AT5G60440
Arabidopsis thaliana
2.7e-07
58.2
75
36.0
AT1G65360
Arabidopsis thaliana
4.7e-07
57.4
57
45.6
AT1G72350
Arabidopsis thaliana
4.7e-07
57.4
69
40.6
AT5G26630
Arabidopsis thaliana
4.7e-07
57.4
204
27.0
AT1G31140
Arabidopsis thaliana
6.1e-07
57.0
146
26.0
AT1G65330
Arabidopsis thaliana
6.1e-07
57.0
180
28.3
AT3G66656
Arabidopsis thaliana
1.0e-06
56.2
57
40.4
AT5G65060
Arabidopsis thaliana
1.0e-06
56.2
185
28.1
AT2G24840
Arabidopsis thaliana
1.4e-06
55.8
71
36.6
AT3G04100
Arabidopsis thaliana
1.4e-06
55.8
122
27.9
Pp3c17_24040
Physcomitrella patens
1.4e-06
55.8
84
29.8
AT2G34440
Arabidopsis thaliana
2.3e-06
55.1
118
27.1
AT5G48670
Arabidopsis thaliana
2.3e-06
55.1
96
31.2
CM01G00950
Cyanidioschyzon merolae
3.0e-06
54.7
106
30.2
Pp3c3_33370
Physcomitrella patens
3.9e-06
54.3
81
40.7
AT1G17310
Arabidopsis thaliana
6.7e-06
53.5
69
37.7
AT3G05860
Arabidopsis thaliana
8.8e-06
53.1
96
30.2
YPL089C
Saccharomyces cerevisiae strain S288C
8.8e-06
53.1
47
51.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (62 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (21 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing