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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G17960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G17960
Arabidopsis thaliana
2.0e-275
949.1
459
100.0
AT5G26830
Arabidopsis thaliana
1.1e-164
581.3
680
47.5
Pp3c20_19020
Physcomitrella patens
1.1e-127
458.4
669
39.2
WBGene00006617
Caenorhabditis elegans
3.7e-104
380.2
670
34.6
Cre06.g273300
Chlamydomonas reinhardtii
1.8e-98
361.3
637
35.0
FBgn0027081
Drosophila melanogaster
6.3e-96
352.8
670
33.0
SPBC25H2.02
Schizosaccharomyces pombe
1.4e-95
351.7
668
33.7
YIL078W
Saccharomyces cerevisiae strain S288C
4.5e-94
346.7
676
31.1
ENSG00000185418
Homo sapiens
8.5e-93
342.4
670
32.8
ENSG00000113407
Homo sapiens
1.1e-92
342.0
699
31.3
AA0017G01240
Aureococcus anophagefferens
2.7e-91
337.4
625
35.7
Naga_100027g24
Nannochloropsis gaditana
6.8e-90
332.8
733
31.1
gsu127660
Galdieria sulphuraria
4.4e-89
330.1
677
32.2
CM19G02080
Cyanidioschyzon merolae
1.1e-87
325.5
723
30.6
sya00G24090
Synedra acus
1.8e-87
324.7
459
41.2
gene9005
Fragilariopsis cylindrus
2.4e-87
324.3
680
33.4
ptri187600
Phaeodactylum tricornutum
1.9e-84
314.7
723
32.1
emh188920
Emiliania huxleyi
4.7e-83
310.1
685
32.3
ps00G86660
Pseudo-nitzschia multiseries
1.0e-82
308.9
679
31.5
sya00G117890
Synedra acus
3.0e-82
307.4
291
53.6
fso17740
Fistulifera solaris
5.2e-82
306.6
289
53.6
Sro26_g017550
Seminavis robusta
6.8e-82
306.2
291
54.0
fso38200
Fistulifera solaris
1.5e-81
305.1
289
53.3
emh450050
Emiliania huxleyi
2.6e-81
304.3
700
31.6
PSNMU-V1.4_AUG-EV-PASAV3_0075700
Pseudo-nitzschia multistriata
2.6e-81
304.3
288
52.4
tho332940
Thalassiosira oceanica
2.2e-80
301.2
277
54.5
CC00G112810
Cyclotella cryptica
8.3e-80
299.3
291
52.9
gene7879
Fragilariopsis cylindrus
3.1e-79
297.4
313
50.2
tps154930
Thalassiosira pseudonana
3.1e-79
297.4
291
52.9
pte401640
Paramecium tetraurelia
3.5e-78
293.9
287
49.8
ccr27340
Chondrus crispus
1.5e-76
288.5
634
31.5
pte585290
Paramecium tetraurelia
1.5e-76
288.5
282
49.6
pte450430
Paramecium tetraurelia
1.9e-76
288.1
813
26.4
emh692870
Emiliania huxleyi
8.0e-75
282.7
669
31.4
pte590440
Paramecium tetraurelia
5.2e-74
280.0
826
26.3
ENSG00000143374
Homo sapiens
8.9e-74
279.3
281
48.4
SPAC24C9.09
Schizosaccharomyces pombe
4.9e-72
273.5
305
45.9
AT2G04842
Arabidopsis thaliana
6.4e-64
246.5
261
47.1
pte450550
Paramecium tetraurelia
4.1e-63
243.8
407
34.2
emh501230
Emiliania huxleyi
1.2e-62
242.3
272
47.8
emh106280
Emiliania huxleyi
1.2e-62
242.3
272
47.8
YKL194C
Saccharomyces cerevisiae strain S288C
2.3e-61
238.0
380
35.8
Pp3c14_20630
Physcomitrella patens
3.0e-61
237.7
287
42.9
sya00G23870
Synedra acus
2.5e-60
234.6
283
42.0
sya00G65980
Synedra acus
2.5e-60
234.6
283
42.0
AA0054G00250
Aureococcus anophagefferens
4.3e-60
233.8
283
42.8
AA0413G00030
Aureococcus anophagefferens
4.3e-60
233.8
283
42.8
Cre10.g421600
Chlamydomonas reinhardtii
7.3e-60
233.0
286
41.3
Sro185_g080510
Seminavis robusta
9.5e-60
232.6
281
41.3
tho264380
Thalassiosira oceanica
9.5e-60
232.6
283
41.3
Pp3c2_11130
Physcomitrella patens
2.1e-59
231.5
284
42.3
gene6080
Fragilariopsis cylindrus
4.7e-59
230.3
281
41.6
CM15G00980
Cyanidioschyzon merolae
6.2e-59
229.9
280
42.1
tps121010
Thalassiosira pseudonana
1.1e-58
229.2
283
41.3
ps00G94280
Pseudo-nitzschia multiseries
4.0e-58
227.3
281
40.9
ptri193680
Phaeodactylum tricornutum
4.0e-58
227.3
283
41.0
ccr152600
Chondrus crispus
5.2e-58
226.9
263
42.2
fso100440
Fistulifera solaris
5.2e-58
226.9
281
40.6
fso135390
Fistulifera solaris
8.9e-58
226.1
281
40.6
PSNMU-V1.4_AUG-EV-PASAV3_0120720
Pseudo-nitzschia multistriata
8.9e-58
226.1
281
40.6
CC00G23470
Cyclotella cryptica
3.4e-57
224.2
283
40.6
gsu12340
Galdieria sulphuraria
1.3e-56
222.2
281
41.3
emh710830
Emiliania huxleyi
4.9e-56
220.3
283
41.0
emh710810
Emiliania huxleyi
4.9e-56
220.3
283
41.0
sya00G199860
Synedra acus
5.4e-55
216.9
273
42.1
emh122220
Emiliania huxleyi
9.2e-55
216.1
289
41.5
pte06150
Paramecium tetraurelia
4.0e-50
200.7
154
58.4
Ec-05_005060
Ectocarpus siliculosus
1.2e-46
189.1
591
27.7
AT1G18130
Arabidopsis thaliana
6.2e-43
176.8
158
60.1
pte407100
Paramecium tetraurelia
2.5e-36
154.8
478
25.5
gene1049
Fragilariopsis cylindrus
7.1e-31
136.7
459
27.0
pte06130
Paramecium tetraurelia
7.1e-31
136.7
178
40.4
emh242170
Emiliania huxleyi
1.5e-28
129.0
216
34.3
Naga_100062g34
Nannochloropsis gaditana
2.5e-28
128.3
124
50.8
Naga_100462g5
Nannochloropsis gaditana
8.4e-24
113.2
136
37.5
fso38210
Fistulifera solaris
6.0e-22
107.1
201
35.8
sya00G94750
Synedra acus
6.0e-22
107.1
153
37.3
pte04310
Paramecium tetraurelia
1.0e-21
106.3
154
37.7
Ec-27_007050
Ectocarpus siliculosus
1.0e-13
79.7
121
33.9
Ec-27_006860
Ectocarpus siliculosus
9.6e-12
73.2
64
53.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (9 genes)
Seminavis robusta (2 genes)
Synedra acus (6 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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