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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G11880
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G11880
Arabidopsis thaliana
2.4e-279
962.2
490
100.0
Pp3c10_8190
Physcomitrella patens
1.2e-105
385.2
496
44.0
ENSG00000060642
Homo sapiens
1.9e-45
185.3
539
28.4
FBgn0265174
Drosophila melanogaster
6.6e-35
150.2
517
28.6
Cre07.g320650
Chlamydomonas reinhardtii
1.0e-27
126.3
690
24.1
Sro1369_g266930
Seminavis robusta
7.1e-21
103.6
476
26.1
Ec-17_003500
Ectocarpus siliculosus
2.1e-20
102.1
568
23.1
fso31390
Fistulifera solaris
2.7e-20
101.7
519
26.4
tho22100
Thalassiosira oceanica
6.7e-19
97.1
464
27.4
fso118670
Fistulifera solaris
9.6e-18
93.2
446
27.4
gene14800
Fragilariopsis cylindrus
1.6e-17
92.4
563
24.2
SPAC18B11.05
Schizosaccharomyces pombe
2.1e-17
92.0
307
26.4
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
1.5e-15
85.9
489
24.7
CC00G46510
Cyclotella cryptica
4.2e-13
77.8
523
23.7
ps00G29420
Pseudo-nitzschia multiseries
3.5e-12
74.7
488
23.4
pte65550
Paramecium tetraurelia
1.8e-11
72.4
420
21.9
YBR004C
Saccharomyces cerevisiae strain S288C
2.5e-10
68.6
369
25.2
WBGene00020375
Caenorhabditis elegans
3.1e-08
61.6
166
29.5
sya00G67070
Synedra acus
2.6e-07
58.5
176
28.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing