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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G09620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G09620
Arabidopsis thaliana
0.0e+00
2200.2
1092
100.0
Pp3c1_8450
Physcomitrella patens
0.0e+00
1349.3
1099
59.1
Pp3c1_8463
Physcomitrella patens
0.0e+00
1349.3
1099
59.1
FBgn0053123
Drosophila melanogaster
1.1e-292
1007.7
1099
47.6
ENSG00000133706
Homo sapiens
8.9e-290
998.0
1062
47.0
CM17G03360
Cyanidioschyzon merolae
1.4e-279
964.1
1084
45.9
WBGene00003073
Caenorhabditis elegans
5.6e-276
952.2
1105
44.8
ccr63000
Chondrus crispus
3.3e-268
926.4
1111
44.2
SPAC26F1.13c
Schizosaccharomyces pombe
2.6e-265
916.8
1114
43.6
Ec-06_008730
Ectocarpus siliculosus
1.8e-258
894.0
1101
43.7
tps118260
Thalassiosira pseudonana
1.6e-254
880.9
1120
42.9
gsu143450
Galdieria sulphuraria
3.5e-254
879.8
1093
42.7
ptri178330
Phaeodactylum tricornutum
1.8e-253
877.5
1077
42.8
ps00G73790
Pseudo-nitzschia multiseries
2.5e-252
873.6
1090
42.8
CC00G153370
Cyclotella cryptica
4.5e-249
862.8
1117
41.9
Sro166_g074040
Seminavis robusta
7.6e-249
862.1
1076
41.7
fso31640
Fistulifera solaris
4.9e-248
859.4
1080
42.3
PSNMU-V1.4_AUG-EV-PASAV3_0003310
Pseudo-nitzschia multistriata
8.4e-248
858.6
1090
42.0
gene10536
Fragilariopsis cylindrus
1.6e-246
854.4
1107
40.7
fso118420
Fistulifera solaris
7.9e-246
852.0
1106
41.8
YPL160W
Saccharomyces cerevisiae strain S288C
1.1e-242
841.6
1068
42.2
AA0001G02450
Aureococcus anophagefferens
3.0e-237
823.5
1047
42.1
emh124550
Emiliania huxleyi
8.7e-237
822.0
1118
40.8
pte699740
Paramecium tetraurelia
1.3e-216
755.0
1095
39.1
emh695930
Emiliania huxleyi
1.9e-207
724.5
1182
36.3
sya00G139200
Synedra acus
1.3e-120
436.0
642
37.4
tho448240
Thalassiosira oceanica
1.9e-119
432.2
453
47.9
tho307560
Thalassiosira oceanica
7.9e-113
410.2
427
49.9
Cre06.g293582
Chlamydomonas reinhardtii
1.5e-111
406.0
478
46.9
tho307540
Thalassiosira oceanica
1.0e-51
207.2
229
47.2
sya00G171490
Synedra acus
5.1e-11
72.0
398
22.1
Pp3c7_13710
Physcomitrella patens
2.4e-08
63.2
86
37.2
gsu37250
Galdieria sulphuraria
3.1e-08
62.8
390
20.0
Ec-12_001710
Ectocarpus siliculosus
1.5e-07
60.5
179
25.7
AT4G04350
Arabidopsis thaliana
5.8e-07
58.5
87
35.6
Pp3c12_13790
Physcomitrella patens
7.6e-07
58.2
501
20.4
CM16G02060
Cyanidioschyzon merolae
1.3e-06
57.4
95
33.7
tho241180
Thalassiosira oceanica
1.3e-06
57.4
113
27.4
AA0012G01560
Aureococcus anophagefferens
3.8e-06
55.8
86
36.0
ENSG00000137411
Homo sapiens
3.8e-06
55.8
88
36.4
ENSG00000236178
Homo sapiens
3.8e-06
55.8
88
36.4
ENSG00000230985
Homo sapiens
3.8e-06
55.8
88
36.4
ENSG00000223494
Homo sapiens
3.8e-06
55.8
88
36.4
ENSG00000234032
Homo sapiens
3.8e-06
55.8
88
36.4
ENSG00000206476
Homo sapiens
3.8e-06
55.8
88
36.4
AA0005G04190
Aureococcus anophagefferens
6.5e-06
55.1
92
34.8
ENSG00000011376
Homo sapiens
6.5e-06
55.1
91
28.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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