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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0644G00010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0644G00010
Aureococcus anophagefferens
2.3e-204
712.6
343
100.0
AA0006G00950
Aureococcus anophagefferens
2.0e-203
709.5
343
99.4
AA0009G03050
Aureococcus anophagefferens
7.5e-203
707.6
343
99.1
AA0021G00710
Aureococcus anophagefferens
1.9e-198
693.0
343
97.1
AA0016G01460
Aureococcus anophagefferens
5.8e-171
601.7
300
96.0
Naga_100034g6
Nannochloropsis gaditana
1.1e-156
554.3
347
74.6
sya00G221940
Synedra acus
6.5e-154
545.0
347
73.5
Ec-21_002920
Ectocarpus siliculosus
1.8e-151
537.0
343
73.2
gene13281
Fragilariopsis cylindrus
1.8e-151
537.0
347
71.5
gene2100
Fragilariopsis cylindrus
1.8e-151
537.0
347
71.5
ptri219800
Phaeodactylum tricornutum
2.3e-151
536.6
345
71.9
fso18700
Fistulifera solaris
3.9e-151
535.8
345
72.8
fso45240
Fistulifera solaris
3.9e-151
535.8
345
72.8
Ec-11_002180
Ectocarpus siliculosus
1.1e-150
534.3
346
72.3
tho73320
Thalassiosira oceanica
5.7e-150
531.9
346
72.5
PSNMU-V1.4_AUG-EV-PASAV3_0005380
Pseudo-nitzschia multistriata
2.8e-149
529.6
345
71.9
tps128970
Thalassiosira pseudonana
2.8e-149
529.6
346
71.7
CM13G03230
Cyanidioschyzon merolae
3.7e-149
529.3
347
72.3
CC00G39370
Cyclotella cryptica
6.3e-149
528.5
346
72.0
Sro399_g134840
Seminavis robusta
1.8e-148
526.9
345
71.6
ccr33860
Chondrus crispus
5.3e-148
525.4
345
71.9
gsu84250
Galdieria sulphuraria
5.3e-148
525.4
345
71.6
ps00G07360
Pseudo-nitzschia multiseries
1.2e-147
524.2
351
70.4
Pp3c5_8430
Physcomitrella patens
1.7e-146
520.4
359
68.0
Pp3c6_14810
Physcomitrella patens
2.2e-146
520.0
359
68.0
AT2G21790
Arabidopsis thaliana
4.2e-145
515.8
359
68.0
Cre12.g492950
Chlamydomonas reinhardtii
6.1e-144
511.9
359
68.2
SPAC1F7.05
Schizosaccharomyces pombe
1.1e-142
507.7
344
68.0
YER070W
Saccharomyces cerevisiae strain S288C
4.3e-142
505.8
345
68.4
ENSG00000167325
Homo sapiens
4.1e-140
499.2
343
68.2
FBgn0011703
Drosophila melanogaster
5.9e-139
495.4
342
67.5
WBGene00004391
Caenorhabditis elegans
2.1e-136
486.9
339
67.8
Naga_100108g10
Nannochloropsis gaditana
7.4e-134
478.4
365
65.2
YIL066C
Saccharomyces cerevisiae strain S288C
9.7e-134
478.0
345
64.9
fso119370
Fistulifera solaris
2.9e-130
466.5
358
64.2
PSNMU-V1.4_AUG-EV-PASAV3_0064210
Pseudo-nitzschia multistriata
1.9e-129
463.8
366
61.2
ps00G68260
Pseudo-nitzschia multiseries
2.5e-129
463.4
365
61.6
fso30680
Fistulifera solaris
7.2e-129
461.8
358
63.4
ptri146410
Phaeodactylum tricornutum
7.2e-129
461.8
359
62.4
gene6322
Fragilariopsis cylindrus
6.1e-128
458.8
366
60.7
tps144930
Thalassiosira pseudonana
6.7e-127
455.3
351
62.1
tho107100
Thalassiosira oceanica
8.8e-127
454.9
373
60.6
sya00G162990
Synedra acus
1.3e-125
451.1
360
60.8
Ec-06_005120
Ectocarpus siliculosus
1.2e-123
444.5
343
61.8
pte663260
Paramecium tetraurelia
3.5e-123
443.0
337
62.6
pte753340
Paramecium tetraurelia
2.9e-122
439.9
309
67.0
Sro785_g202090
Seminavis robusta
4.7e-120
432.6
361
58.7
CC00G109190
Cyclotella cryptica
4.0e-119
429.5
368
58.4
emh680610
Emiliania huxleyi
4.0e-119
429.5
341
60.4
emh517270
Emiliania huxleyi
1.1e-116
421.4
343
60.6
gsu05760
Galdieria sulphuraria
4.9e-61
236.5
340
38.8
emh07130
Emiliania huxleyi
6.4e-53
209.5
183
56.8
AA0044G00350
Aureococcus anophagefferens
4.5e-46
186.8
86
98.8
emh417920
Emiliania huxleyi
5.7e-33
143.3
147
48.3
emh48490
Emiliania huxleyi
2.2e-32
141.4
107
59.8
AA0044G00360
Aureococcus anophagefferens
3.4e-30
134.0
68
98.5
Ec-17_003700
Ectocarpus siliculosus
3.3e-25
117.5
79
67.1
sya00G266120
Synedra acus
1.1e-20
102.4
305
24.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (7 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing