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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0058G00020
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0058G00020
Aureococcus anophagefferens
0.0e+00
4360.8
2254
100.0
Naga_100125g10
Nannochloropsis gaditana
0.0e+00
1621.3
2474
42.7
Ec-10_005070
Ectocarpus siliculosus
0.0e+00
1504.6
2472
40.4
Sro1830_g300310
Seminavis robusta
0.0e+00
1413.3
2423
38.5
sya00G103910
Synedra acus
0.0e+00
1400.6
2370
38.1
Pp3c13_4500
Physcomitrella patens
0.0e+00
1389.8
2301
38.5
PSNMU-V1.4_AUG-EV-PASAV3_0016970
Pseudo-nitzschia multistriata
0.0e+00
1384.8
2394
37.3
gene20466
Fragilariopsis cylindrus
0.0e+00
1383.6
2325
38.6
ENSG00000177084
Homo sapiens
0.0e+00
1378.6
2340
37.3
tps122870
Thalassiosira pseudonana
0.0e+00
1368.2
2291
38.8
ptri15010
Phaeodactylum tricornutum
0.0e+00
1365.1
2388
38.3
AT1G08260
Arabidopsis thaliana
0.0e+00
1361.3
2256
38.2
fso174830
Fistulifera solaris
0.0e+00
1358.2
2371
38.2
fso66600
Fistulifera solaris
0.0e+00
1357.8
2364
38.2
ps00G22320
Pseudo-nitzschia multiseries
0.0e+00
1337.0
2267
38.0
AT2G27120
Arabidopsis thaliana
0.0e+00
1321.6
2238
37.6
FBgn0264326
Drosophila melanogaster
0.0e+00
1318.9
2297
37.3
SPBC25H2.13c
Schizosaccharomyces pombe
0.0e+00
1260.7
2249
35.5
YNL262W
Saccharomyces cerevisiae strain S288C
0.0e+00
1238.0
2291
35.4
WBGene00009368
Caenorhabditis elegans
0.0e+00
1222.2
2293
35.3
ccr171860
Chondrus crispus
0.0e+00
1184.1
2338
35.4
gsu133780
Galdieria sulphuraria
5.9e-304
1046.2
1967
35.2
CM17G00980
Cyanidioschyzon merolae
9.7e-299
1028.9
2281
35.1
pte125380
Paramecium tetraurelia
4.8e-282
973.4
1974
32.5
Cre03.g179961
Chlamydomonas reinhardtii
4.9e-274
946.8
2421
32.3
CC00G60270
Cyclotella cryptica
1.4e-196
689.5
762
48.3
CC00G45670
Cyclotella cryptica
7.3e-153
544.3
513
54.8
CC00G142060
Cyclotella cryptica
2.0e-118
429.9
439
51.0
CC00G135150
Cyclotella cryptica
9.3e-116
421.0
497
46.9
emh452610
Emiliania huxleyi
6.8e-50
202.2
790
27.0
tho197820
Thalassiosira oceanica
1.9e-44
184.1
700
28.1
Ec-00_003210
Ectocarpus siliculosus
6.6e-21
105.9
134
43.3
tho409200
Thalassiosira oceanica
1.9e-15
87.8
442
23.5
gsu82940
Galdieria sulphuraria
9.9e-09
65.5
316
25.9
gsu02200
Galdieria sulphuraria
2.9e-08
63.9
257
26.5
emh122000
Emiliania huxleyi
3.8e-08
63.5
207
26.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing