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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0034G00050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0034G00050
Aureococcus anophagefferens
3.4e-206
718.8
359
100.0
tho192240
Thalassiosira oceanica
1.1e-87
325.1
356
52.2
PSNMU-V1.4_AUG-EV-PASAV3_0071510
Pseudo-nitzschia multistriata
7.9e-86
318.9
354
50.8
ptri04200
Phaeodactylum tricornutum
3.6e-78
293.5
379
47.0
ps00G90570
Pseudo-nitzschia multiseries
3.9e-77
290.0
322
51.9
emh471960
Emiliania huxleyi
5.2e-61
236.5
348
40.5
gene5191
Fragilariopsis cylindrus
2.7e-46
187.6
204
49.5
gene5758
Fragilariopsis cylindrus
5.2e-45
183.3
227
44.5
Sro1718_g293330
Seminavis robusta
6.8e-37
156.4
361
33.8
ccr150820
Chondrus crispus
1.6e-33
145.2
351
35.3
Naga_100213g10
Nannochloropsis gaditana
4.3e-31
137.1
380
30.3
emh44590
Emiliania huxleyi
8.0e-30
132.9
171
45.6
Pp3c14_26420
Physcomitrella patens
8.9e-29
129.4
337
31.8
Pp3c1_6990
Physcomitrella patens
3.4e-28
127.5
318
32.7
AA0012G03170
Aureococcus anophagefferens
5.7e-28
126.7
301
33.9
AT1G65560
Arabidopsis thaliana
9.8e-28
125.9
234
39.7
sya00G212780
Synedra acus
9.8e-28
125.9
252
38.1
gene19246
Fragilariopsis cylindrus
1.8e-26
121.7
371
27.8
pte390730
Paramecium tetraurelia
1.8e-26
121.7
223
33.6
pte325990
Paramecium tetraurelia
4.1e-26
120.6
337
28.5
AT1G26320
Arabidopsis thaliana
1.2e-25
119.0
347
30.5
AT5G16970
Arabidopsis thaliana
1.0e-24
115.9
347
31.1
AT5G16990
Arabidopsis thaliana
8.6e-24
112.8
346
31.2
AT5G16980
Arabidopsis thaliana
2.5e-23
111.3
231
34.6
AT5G16960
Arabidopsis thaliana
4.3e-23
110.5
323
30.0
AT5G37980
Arabidopsis thaliana
4.3e-23
110.5
234
34.2
ps00G77670
Pseudo-nitzschia multiseries
4.3e-23
110.5
239
34.3
AT3G03080
Arabidopsis thaliana
5.6e-23
110.2
231
34.6
AT5G17000
Arabidopsis thaliana
2.1e-22
108.2
344
30.2
AT5G38000
Arabidopsis thaliana
3.6e-22
107.5
324
29.9
SPAPB24D3.08c
Schizosaccharomyces pombe
3.6e-22
107.5
349
29.2
AT5G37940
Arabidopsis thaliana
6.2e-22
106.7
324
30.2
ENSG00000106853
Homo sapiens
6.2e-22
106.7
341
27.6
ENSG00000140043
Homo sapiens
3.1e-21
104.4
368
25.0
WBGene00010911
Caenorhabditis elegans
2.0e-20
101.7
353
25.2
AT3G59845
Arabidopsis thaliana
2.6e-20
101.3
343
29.2
pte74800
Paramecium tetraurelia
9.8e-20
99.4
376
27.1
tps04730
Thalassiosira pseudonana
1.3e-19
99.0
241
33.6
Pp3c11_25890
Physcomitrella patens
8.3e-19
96.3
337
27.6
emh716520
Emiliania huxleyi
4.1e-18
94.0
337
29.1
emh248770
Emiliania huxleyi
5.4e-18
93.6
351
29.1
pte34130
Paramecium tetraurelia
5.4e-18
93.6
370
25.7
AT1G49670
Arabidopsis thaliana
1.2e-17
92.4
206
33.5
Cre16.g677950
Chlamydomonas reinhardtii
4.6e-17
90.5
204
32.8
emh513730
Emiliania huxleyi
2.3e-16
88.2
364
26.4
AA0006G05520
Aureococcus anophagefferens
3.9e-16
87.4
334
29.3
AA0005G01580
Aureococcus anophagefferens
3.3e-15
84.3
318
25.5
ENSG00000180011
Homo sapiens
5.6e-15
83.6
349
25.8
emh655430
Emiliania huxleyi
7.3e-15
83.2
373
25.7
pte416430
Paramecium tetraurelia
1.2e-14
82.4
340
25.3
emh655410
Emiliania huxleyi
2.1e-14
81.6
364
25.3
emh513750
Emiliania huxleyi
2.8e-14
81.3
364
25.3
pte426470
Paramecium tetraurelia
2.8e-14
81.3
348
25.0
ps00G147920
Pseudo-nitzschia multiseries
1.1e-13
79.3
206
30.1
YML131W
Saccharomyces cerevisiae strain S288C
5.8e-12
73.6
213
30.0
gene7914
Fragilariopsis cylindrus
1.3e-11
72.4
334
24.3
emh452690
Emiliania huxleyi
1.1e-10
69.3
229
31.0
emh194500
Emiliania huxleyi
1.1e-10
69.3
229
31.0
AA0009G01030
Aureococcus anophagefferens
2.7e-09
64.7
140
35.0
AA0014G01250
Aureococcus anophagefferens
2.3e-08
61.6
182
34.1
Cre16.g674050
Chlamydomonas reinhardtii
3.9e-08
60.8
239
30.5
fso106860
Fistulifera solaris
2.5e-07
58.2
159
32.7
Sro142_g066270
Seminavis robusta
3.3e-07
57.8
297
24.2
fso193860
Fistulifera solaris
7.3e-07
56.6
229
29.3
ps00G164330
Pseudo-nitzschia multiseries
9.5e-07
56.2
206
30.1
CC00G11550
Cyclotella cryptica
6.2e-06
53.5
215
26.0
emh301610
Emiliania huxleyi
6.2e-06
53.5
144
36.1
emh113560
Emiliania huxleyi
6.2e-06
53.5
144
36.1
ptri207500
Phaeodactylum tricornutum
8.1e-06
53.1
190
27.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (12 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing