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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0031G00520
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0031G00520
Aureococcus anophagefferens
9.0e-199
694.1
356
100.0
sya00G39500
Synedra acus
8.2e-51
202.6
341
40.8
Sro2055_g312810
Seminavis robusta
2.6e-49
197.6
386
37.3
fso26100
Fistulifera solaris
3.8e-48
193.7
351
38.2
fso116940
Fistulifera solaris
1.6e-46
188.3
354
37.0
ptri23730
Phaeodactylum tricornutum
3.6e-46
187.2
360
38.6
tps96320
Thalassiosira pseudonana
9.4e-31
136.0
357
33.9
tho08540
Thalassiosira oceanica
1.2e-30
135.6
322
33.5
CC00G139910
Cyclotella cryptica
2.6e-28
127.9
339
33.3
Sro23_g015730
Seminavis robusta
4.7e-22
107.1
330
29.1
Cre06.g297400
Chlamydomonas reinhardtii
8.0e-22
106.3
299
31.4
ENSG00000130347
Homo sapiens
2.3e-21
104.8
334
31.4
Pp3c7_23980
Physcomitrella patens
1.5e-20
102.1
316
30.4
AT1G23740
Arabidopsis thaliana
2.2e-19
98.2
316
29.4
Sro707_g190550
Seminavis robusta
2.2e-19
98.2
267
31.8
sya00G224000
Synedra acus
3.7e-19
97.4
143
43.4
sya00G232250
Synedra acus
3.7e-19
97.4
143
43.4
gsu130840
Galdieria sulphuraria
8.3e-19
96.3
321
30.5
emh658870
Emiliania huxleyi
1.1e-18
95.9
202
38.6
Cre16.g674050
Chlamydomonas reinhardtii
1.4e-18
95.5
347
30.8
Pp3c3_23410
Physcomitrella patens
1.4e-18
95.5
208
35.6
CC00G210560
Cyclotella cryptica
9.1e-18
92.8
324
28.4
gsu130820
Galdieria sulphuraria
4.5e-17
90.5
201
36.8
sya00G76790
Synedra acus
5.9e-17
90.1
323
28.2
Pp3c2_37490
Physcomitrella patens
2.9e-16
87.8
234
31.6
Pp3c2_37350
Physcomitrella patens
2.9e-16
87.8
234
31.6
AT4G13010
Arabidopsis thaliana
3.8e-16
87.4
316
29.1
Pp3c1_4270
Physcomitrella patens
3.8e-16
87.4
280
28.2
Sro127_g060910
Seminavis robusta
3.8e-16
87.4
324
28.4
SPBC16A3.02c
Schizosaccharomyces pombe
5.0e-16
87.0
315
26.3
ccr102980
Chondrus crispus
6.5e-16
86.7
319
28.5
Sro282_g107500
Seminavis robusta
6.5e-16
86.7
337
28.8
Sro911_g219180
Seminavis robusta
8.5e-16
86.3
212
33.5
sya00G17180
Synedra acus
8.5e-16
86.3
251
28.7
Sro643_g180330
Seminavis robusta
1.5e-15
85.5
344
29.1
ccr102960
Chondrus crispus
3.2e-15
84.3
288
30.6
Pp3c14_1550
Physcomitrella patens
3.2e-15
84.3
263
28.9
AT3G15090
Arabidopsis thaliana
4.2e-15
84.0
269
26.4
gene16059
Fragilariopsis cylindrus
2.1e-14
81.6
261
27.2
ps00G191200
Pseudo-nitzschia multiseries
3.6e-14
80.9
286
30.1
gene3366
Fragilariopsis cylindrus
2.3e-13
78.2
261
26.8
emh753300
Emiliania huxleyi
3.0e-13
77.8
304
28.9
Pp3c9_1500
Physcomitrella patens
6.8e-13
76.6
214
32.2
FBgn0031500
Drosophila melanogaster
1.2e-12
75.9
287
26.5
Pp3c3_18200
Physcomitrella patens
2.0e-12
75.1
242
27.3
Sro1898_g304150
Seminavis robusta
7.5e-12
73.2
143
39.2
Sro512_g157550
Seminavis robusta
7.5e-12
73.2
143
39.2
ptri199550
Phaeodactylum tricornutum
1.3e-11
72.4
300
29.7
WBGene00044305
Caenorhabditis elegans
1.7e-11
72.0
244
31.1
Pp3c15_2540
Physcomitrella patens
3.7e-11
70.9
216
29.6
emh395430
Emiliania huxleyi
6.3e-11
70.1
231
31.2
gene9213
Fragilariopsis cylindrus
6.3e-11
70.1
285
27.7
gene6780
Fragilariopsis cylindrus
1.4e-10
68.9
241
31.1
Pp3c17_7890
Physcomitrella patens
1.8e-10
68.6
211
29.4
AA0013G01930
Aureococcus anophagefferens
2.4e-10
68.2
338
31.4
Ec-17_002760
Ectocarpus siliculosus
5.4e-10
67.0
294
27.2
AT4G21580
Arabidopsis thaliana
7.0e-10
66.6
209
31.6
Cre16.g677950
Chlamydomonas reinhardtii
7.0e-10
66.6
323
28.8
Pp3c13_1410
Physcomitrella patens
7.0e-10
66.6
354
26.3
Sro2718_g335430
Seminavis robusta
7.0e-10
66.6
337
26.4
emh170150
Emiliania huxleyi
9.1e-10
66.2
333
28.5
SPAC2E1P3.01
Schizosaccharomyces pombe
1.6e-09
65.5
217
32.3
sya00G167970
Synedra acus
2.0e-09
65.1
325
25.8
AT3G56460
Arabidopsis thaliana
2.7e-09
64.7
286
25.2
Pp3c16_1190
Physcomitrella patens
2.7e-09
64.7
291
24.4
Pp3c11_25890
Physcomitrella patens
3.5e-09
64.3
286
26.9
CC00G11550
Cyclotella cryptica
4.5e-09
63.9
341
25.2
sya00G23160
Synedra acus
4.5e-09
63.9
333
24.9
Sro24_g016390
Seminavis robusta
7.7e-09
63.2
309
26.2
Sro355_g125180
Seminavis robusta
1.0e-08
62.8
191
34.0
Sro777_g200990
Seminavis robusta
1.0e-08
62.8
332
26.2
Pp3c2_35890
Physcomitrella patens
1.3e-08
62.4
333
25.8
ptri243740
Phaeodactylum tricornutum
1.3e-08
62.4
214
30.4
Sro1688_g291250
Seminavis robusta
1.7e-08
62.0
340
27.1
sya00G70820
Synedra acus
1.7e-08
62.0
341
24.3
tps125520
Thalassiosira pseudonana
1.7e-08
62.0
347
25.4
Pp3c26_10280
Physcomitrella patens
3.8e-08
60.8
324
25.6
Sro29_g019120
Seminavis robusta
5.0e-08
60.5
292
27.1
tho504040
Thalassiosira oceanica
5.0e-08
60.5
370
26.8
Pp3s155_50
Physcomitrella patens
6.6e-08
60.1
287
25.8
Pp3c12_2540
Physcomitrella patens
8.6e-08
59.7
210
28.6
Sro142_g066270
Seminavis robusta
8.6e-08
59.7
200
28.5
Ec-02_000990
Ectocarpus siliculosus
1.1e-07
59.3
166
29.5
ENSG00000108828
Homo sapiens
1.5e-07
58.9
297
28.3
ENSG00000116791
Homo sapiens
1.9e-07
58.5
209
28.7
Pp3c3_23630
Physcomitrella patens
4.2e-07
57.4
266
27.8
Pp3c3_23550
Physcomitrella patens
4.2e-07
57.4
266
27.8
Cre01.g035350
Chlamydomonas reinhardtii
5.5e-07
57.0
378
25.1
Sro227_g092260
Seminavis robusta
5.5e-07
57.0
337
29.1
Cre10.g449750
Chlamydomonas reinhardtii
7.2e-07
56.6
127
39.4
Sro19_g013310
Seminavis robusta
7.2e-07
56.6
185
31.9
Naga_101380g1
Nannochloropsis gaditana
1.2e-06
55.8
203
33.0
sya00G94110
Synedra acus
1.6e-06
55.5
281
28.1
sya00G181380
Synedra acus
1.6e-06
55.5
240
29.2
AA0006G05520
Aureococcus anophagefferens
2.8e-06
54.7
292
27.4
SPBC337.11
Schizosaccharomyces pombe
3.6e-06
54.3
203
27.6
Sro527_g160560
Seminavis robusta
4.7e-06
53.9
203
27.1
sya00G116590
Synedra acus
4.7e-06
53.9
170
34.1
YOL086C
Saccharomyces cerevisiae strain S288C
8.0e-06
53.1
241
27.8
sya00G139130
Synedra acus
8.0e-06
53.1
207
28.0
sya00G212780
Synedra acus
8.0e-06
53.1
116
37.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (19 genes)
Synedra acus (13 genes)
Physcomitrella patens (19 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing