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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0024G00230
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0024G00230
Aureococcus anophagefferens
0.0e+00
1149.4
577
100.0
AA0030G00240
Aureococcus anophagefferens
0.0e+00
1101.7
578
96.4
Ec-15_002360
Ectocarpus siliculosus
8.1e-157
555.4
514
56.2
ccr154120
Chondrus crispus
3.0e-151
537.0
517
55.7
Naga_100018g48
Nannochloropsis gaditana
3.0e-151
537.0
514
55.4
tps84830
Thalassiosira pseudonana
1.1e-145
518.5
528
52.8
tho161400
Thalassiosira oceanica
1.9e-142
507.7
552
50.7
Sro20_g014070
Seminavis robusta
9.6e-142
505.4
538
51.1
Cre07.g313700
Chlamydomonas reinhardtii
4.7e-141
503.1
516
51.4
PSNMU-V1.4_AUG-EV-PASAV3_0099320
Pseudo-nitzschia multistriata
4.9e-138
493.0
535
49.5
ps00G84740
Pseudo-nitzschia multiseries
6.4e-138
492.7
535
50.1
sya00G56360
Synedra acus
8.4e-138
492.3
569
48.3
gene18232
Fragilariopsis cylindrus
9.3e-137
488.8
542
48.5
fso39700
Fistulifera solaris
2.1e-136
487.6
547
49.9
fso109630
Fistulifera solaris
2.7e-136
487.3
548
49.6
CC00G49800
Cyclotella cryptica
3.0e-135
483.8
557
48.7
ptri18330
Phaeodactylum tricornutum
3.3e-134
480.3
544
48.9
Pp3c1_10010
Physcomitrella patens
6.2e-133
476.1
519
48.2
gsu80310
Galdieria sulphuraria
1.8e-132
474.6
528
48.9
CM19G01920
Cyanidioschyzon merolae
2.9e-130
467.2
550
47.6
AT5G64050
Arabidopsis thaliana
3.2e-129
463.8
518
48.3
emh572500
Emiliania huxleyi
1.9e-118
427.9
534
48.5
emh131730
Emiliania huxleyi
3.4e-107
390.6
516
46.5
FBgn0036629
Drosophila melanogaster
1.4e-60
235.7
323
39.9
ENSG00000103356
Homo sapiens
1.2e-59
232.6
326
39.0
YOL033W
Saccharomyces cerevisiae strain S288C
4.5e-59
230.7
374
36.4
AA0002G03570
Aureococcus anophagefferens
3.2e-52
208.0
269
45.7
SPAPB1A10.11c
Schizosaccharomyces pombe
2.7e-51
204.9
327
34.9
WBGene00001338
Caenorhabditis elegans
3.9e-50
201.1
365
35.3
sya00G168530
Synedra acus
2.2e-45
185.3
387
33.6
sya00G269110
Synedra acus
1.7e-26
122.5
272
32.0
YGL245W
Saccharomyces cerevisiae strain S288C
4.9e-13
77.8
240
26.7
gene8215
Fragilariopsis cylindrus
3.5e-11
71.6
252
25.4
Naga_100001g200
Nannochloropsis gaditana
6.0e-11
70.9
283
24.7
Ec-06_008480
Ectocarpus siliculosus
2.3e-10
68.9
291
23.7
pte731460
Paramecium tetraurelia
3.0e-10
68.6
233
24.0
Pp3c2_37890
Physcomitrella patens
3.9e-10
68.2
263
25.1
SPAC17A5.15c
Schizosaccharomyces pombe
3.9e-10
68.2
226
25.2
sya00G196850
Synedra acus
5.1e-10
67.8
209
24.4
fso29000
Fistulifera solaris
8.7e-10
67.0
215
26.0
fso35220
Fistulifera solaris
8.7e-10
67.0
215
26.0
CC00G36090
Cyclotella cryptica
1.1e-09
66.6
225
24.4
AT5G26710
Arabidopsis thaliana
1.9e-09
65.9
242
24.0
PSNMU-V1.4_AUG-EV-PASAV3_0110410
Pseudo-nitzschia multistriata
3.3e-09
65.1
266
24.4
tps54900
Thalassiosira pseudonana
3.3e-09
65.1
219
26.0
CM03G00830
Cyanidioschyzon merolae
5.6e-09
64.3
273
25.6
Sro110_g054990
Seminavis robusta
7.4e-09
63.9
209
24.4
ps00G105560
Pseudo-nitzschia multiseries
9.6e-09
63.5
251
25.1
emh310620
Emiliania huxleyi
1.6e-08
62.8
113
31.0
PSNMU-V1.4_AUG-EV-PASAV3_0018750
Pseudo-nitzschia multistriata
1.6e-08
62.8
219
26.5
ps00G189580
Pseudo-nitzschia multiseries
1.6e-08
62.8
219
23.7
Pp3c12_18480
Physcomitrella patens
2.1e-08
62.4
229
25.3
Pp3c12_18499
Physcomitrella patens
2.1e-08
62.4
229
25.3
Pp3c25_11910
Physcomitrella patens
2.8e-08
62.0
230
25.7
AA0012G01690
Aureococcus anophagefferens
3.7e-08
61.6
294
23.1
gene9896
Fragilariopsis cylindrus
6.2e-08
60.8
214
26.2
ptri227370
Phaeodactylum tricornutum
8.1e-08
60.5
264
23.9
Cre11.g467547
Chlamydomonas reinhardtii
1.4e-07
59.7
232
24.6
AA0002G06550
Aureococcus anophagefferens
3.1e-07
58.5
222
26.6
ccr98860
Chondrus crispus
4.0e-07
58.2
115
30.4
gene18729
Fragilariopsis cylindrus
5.3e-07
57.8
118
33.1
ptri04920
Phaeodactylum tricornutum
6.9e-07
57.4
218
24.8
tho156480
Thalassiosira oceanica
6.9e-07
57.4
274
25.5
Sro1838_g300780
Seminavis robusta
1.5e-06
56.2
140
31.4
Sro151_g069130
Seminavis robusta
2.0e-06
55.8
117
29.9
WBGene00001337
Caenorhabditis elegans
2.6e-06
55.5
251
21.9
ENSG00000136628
Homo sapiens
2.6e-06
55.5
259
23.9
pte96250
Paramecium tetraurelia
4.5e-06
54.7
118
32.2
fso16330
Fistulifera solaris
5.8e-06
54.3
115
29.6
fso125890
Fistulifera solaris
5.8e-06
54.3
115
29.6
pte159360
Paramecium tetraurelia
9.9e-06
53.5
118
31.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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