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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0021G00710
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0021G00710
Aureococcus anophagefferens
0.0e+00
1609.7
788
100.0
AA0006G00950
Aureococcus anophagefferens
0.0e+00
1560.8
788
96.3
AA0009G03050
Aureococcus anophagefferens
0.0e+00
1558.1
788
96.3
Naga_100034g6
Nannochloropsis gaditana
0.0e+00
1207.6
792
71.7
Ec-21_002920
Ectocarpus siliculosus
0.0e+00
1172.5
800
70.2
ptri219800
Phaeodactylum tricornutum
0.0e+00
1160.2
813
67.9
fso45240
Fistulifera solaris
0.0e+00
1154.8
801
69.2
sya00G221940
Synedra acus
0.0e+00
1151.7
810
68.4
fso18700
Fistulifera solaris
0.0e+00
1150.2
801
68.9
tps128970
Thalassiosira pseudonana
0.0e+00
1150.2
818
67.0
Sro399_g134840
Seminavis robusta
0.0e+00
1145.6
809
68.4
CC00G39370
Cyclotella cryptica
0.0e+00
1144.8
812
67.0
gene13281
Fragilariopsis cylindrus
0.0e+00
1120.5
777
67.6
PSNMU-V1.4_AUG-EV-PASAV3_0005380
Pseudo-nitzschia multistriata
0.0e+00
1119.0
824
65.5
ps00G07360
Pseudo-nitzschia multiseries
0.0e+00
1110.5
769
68.3
tho73320
Thalassiosira oceanica
0.0e+00
1090.5
790
66.1
CM13G03230
Cyanidioschyzon merolae
0.0e+00
1085.5
779
66.6
ENSG00000167325
Homo sapiens
0.0e+00
1076.2
796
64.1
Pp3c5_8430
Physcomitrella patens
1.7e-312
1073.2
814
62.3
gsu84250
Galdieria sulphuraria
2.6e-312
1072.4
759
67.1
SPAC1F7.05
Schizosaccharomyces pombe
4.4e-312
1071.6
781
63.9
ccr33860
Chondrus crispus
7.8e-312
1070.8
802
63.7
Pp3c6_14810
Physcomitrella patens
1.3e-311
1070.1
814
62.0
AT2G21790
Arabidopsis thaliana
8.6e-311
1067.4
817
62.4
YER070W
Saccharomyces cerevisiae strain S288C
2.1e-304
1046.2
770
63.9
WBGene00004391
Caenorhabditis elegans
6.0e-304
1044.6
786
62.7
FBgn0011703
Drosophila melanogaster
4.0e-300
1031.9
805
60.6
Cre12.g492950
Chlamydomonas reinhardtii
2.4e-297
1022.7
783
62.5
YIL066C
Saccharomyces cerevisiae strain S288C
3.0e-295
1015.8
762
62.9
Naga_100108g10
Nannochloropsis gaditana
3.3e-294
1012.3
800
60.9
Ec-11_002180
Ectocarpus siliculosus
1.2e-283
977.2
649
71.3
pte663260
Paramecium tetraurelia
4.0e-268
925.6
772
57.9
gene2100
Fragilariopsis cylindrus
1.3e-266
920.6
772
58.4
AA0016G01460
Aureococcus anophagefferens
3.0e-263
909.4
458
96.9
ps00G68260
Pseudo-nitzschia multiseries
3.4e-259
896.0
845
55.1
sya00G162990
Synedra acus
2.2e-258
893.3
824
54.7
fso30680
Fistulifera solaris
2.9e-258
892.9
818
56.1
PSNMU-V1.4_AUG-EV-PASAV3_0064210
Pseudo-nitzschia multistriata
5.0e-258
892.1
798
57.1
tho107100
Thalassiosira oceanica
3.6e-256
885.9
852
53.3
Ec-06_005120
Ectocarpus siliculosus
3.3e-254
879.4
790
54.2
tps144930
Thalassiosira pseudonana
1.7e-253
877.1
823
54.3
gene6322
Fragilariopsis cylindrus
1.1e-252
874.4
797
55.6
fso119370
Fistulifera solaris
1.2e-251
870.9
773
58.3
Sro785_g202090
Seminavis robusta
1.2e-240
834.3
846
50.9
CC00G109190
Cyclotella cryptica
8.8e-239
828.2
842
52.1
emh680610
Emiliania huxleyi
6.3e-237
822.0
755
54.0
pte753340
Paramecium tetraurelia
5.3e-228
792.3
585
63.4
ptri146410
Phaeodactylum tricornutum
7.5e-214
745.3
696
54.2
AA0644G00010
Aureococcus anophagefferens
8.9e-199
695.3
343
97.1
emh517270
Emiliania huxleyi
6.6e-186
652.5
495
62.8
gsu05760
Galdieria sulphuraria
2.1e-115
418.3
672
37.1
AA0044G00360
Aureococcus anophagefferens
1.8e-114
415.2
212
93.9
emh07130
Emiliania huxleyi
6.2e-83
310.5
262
57.6
Ec-17_003700
Ectocarpus siliculosus
1.7e-80
302.4
279
54.1
AA0009G03030
Aureococcus anophagefferens
3.9e-77
291.2
149
97.3
emh48490
Emiliania huxleyi
2.7e-62
241.9
255
47.5
AA0044G00350
Aureococcus anophagefferens
4.3e-44
181.4
86
96.5
ps00G85260
Pseudo-nitzschia multiseries
2.2e-40
169.1
135
61.5
sya00G266120
Synedra acus
4.9e-40
167.9
449
27.4
Pp3c22_3180
Physcomitrella patens
1.0e-37
160.2
156
52.6
emh417920
Emiliania huxleyi
5.8e-33
144.4
147
49.0
ptri146390
Phaeodactylum tricornutum
6.5e-32
141.0
105
64.8
pte753360
Paramecium tetraurelia
5.1e-29
131.3
157
46.5
emh517290
Emiliania huxleyi
3.7e-19
98.6
87
58.6
tho243460
Thalassiosira oceanica
8.2e-19
97.4
96
53.1
Pp3c22_4130
Physcomitrella patens
6.9e-18
94.4
62
69.4
Ec-11_002170
Ectocarpus siliculosus
1.8e-13
79.7
56
67.9
emh551450
Emiliania huxleyi
1.5e-07
60.1
42
64.3
AA0040G00610
Aureococcus anophagefferens
1.6e-06
56.6
73
46.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (9 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing