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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0016G01850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0016G01850
Aureococcus anophagefferens
0.0e+00
6219.8
3758
100.0
Ec-25_000070
Ectocarpus siliculosus
2.7e-83
313.9
1332
27.6
Ec-10_004250
Ectocarpus siliculosus
2.3e-50
204.5
214
47.7
CC00G25750
Cyclotella cryptica
3.8e-45
187.2
446
28.7
tps71420
Thalassiosira pseudonana
5.1e-42
176.8
227
42.7
tps139660
Thalassiosira pseudonana
8.6e-42
176.0
430
28.6
CC00G09120
Cyclotella cryptica
4.3e-41
173.7
250
40.8
fso49570
Fistulifera solaris
3.1e-39
167.5
226
41.6
sya00G77340
Synedra acus
3.1e-39
167.5
189
46.6
fso27100
Fistulifera solaris
2.6e-38
164.5
226
41.2
ptri07040
Phaeodactylum tricornutum
1.3e-37
162.2
268
39.9
Sro96_g049630
Seminavis robusta
2.5e-33
147.9
287
36.6
ps00G196350
Pseudo-nitzschia multiseries
1.6e-32
145.2
190
41.1
gene16163
Fragilariopsis cylindrus
2.1e-32
144.8
179
43.6
PSNMU-V1.4_AUG-EV-PASAV3_0034020
Pseudo-nitzschia multistriata
4.5e-30
137.1
289
34.6
Sro1500_g277850
Seminavis robusta
9.9e-30
136.0
227
37.9
Naga_100021g22
Nannochloropsis gaditana
2.6e-22
111.3
244
35.2
Ec-12_001730
Ectocarpus siliculosus
4.3e-17
94.0
231
29.4
AA0017G00820
Aureococcus anophagefferens
1.8e-10
72.0
209
25.8
Ec-05_002650
Ectocarpus siliculosus
8.7e-10
69.7
203
21.7
CC00G52210
Cyclotella cryptica
1.6e-08
65.5
151
25.2
Ec-28_000400
Ectocarpus siliculosus
6.3e-08
63.5
151
27.2
pte140030
Paramecium tetraurelia
1.1e-07
62.8
194
24.7
SPCC830.06
Schizosaccharomyces pombe
4.1e-07
60.8
141
27.0
CC00G06320
Cyclotella cryptica
9.0e-07
59.7
230
20.9
CC00G122540
Cyclotella cryptica
1.2e-06
59.3
227
20.7
AT1G74740
Arabidopsis thaliana
3.4e-06
57.8
151
29.8
AA0008G00130
Aureococcus anophagefferens
4.5e-06
57.4
90
33.3
ENSG00000115756
Homo sapiens
1.0e-05
56.2
158
25.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
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Positions and Genes
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