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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0016G00690
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0016G00690
Aureococcus anophagefferens
5.6e-148
525.0
276
100.0
tho343640
Thalassiosira oceanica
7.8e-33
142.5
276
37.3
tps04070
Thalassiosira pseudonana
2.0e-28
127.9
315
33.0
CC00G57840
Cyclotella cryptica
6.4e-27
122.9
312
31.4
ptri123580
Phaeodactylum tricornutum
1.6e-25
118.2
315
32.4
fso45180
Fistulifera solaris
3.0e-24
114.0
277
33.2
fso18650
Fistulifera solaris
5.1e-24
113.2
275
33.1
ps00G132420
Pseudo-nitzschia multiseries
5.1e-24
113.2
312
31.1
PSNMU-V1.4_AUG-EV-PASAV3_0036420
Pseudo-nitzschia multistriata
9.5e-23
109.0
300
28.7
Sro15_g011060
Seminavis robusta
2.8e-22
107.5
281
31.3
Cre09.g386350
Chlamydomonas reinhardtii
1.5e-20
101.7
313
30.4
ENSG00000171703
Homo sapiens
7.6e-20
99.4
281
31.7
sya00G148430
Synedra acus
1.3e-19
98.6
307
31.6
Naga_100012g30
Nannochloropsis gaditana
2.2e-19
97.8
154
39.6
gene19528
Fragilariopsis cylindrus
8.4e-19
95.9
300
28.0
SPAC20H4.03c
Schizosaccharomyces pombe
9.2e-18
92.4
299
29.1
ccr62840
Chondrus crispus
7.8e-17
89.4
118
42.4
FBgn0010422
Drosophila melanogaster
3.9e-16
87.0
290
29.0
ENSG00000187735
Homo sapiens
3.9e-16
87.0
297
28.6
YGL043W
Saccharomyces cerevisiae strain S288C
1.1e-15
85.5
314
28.3
CM20G05010
Cyanidioschyzon merolae
1.9e-15
84.7
116
38.8
Pp3c4_25990
Physcomitrella patens
8.1e-14
79.3
116
37.1
WBGene00012000
Caenorhabditis elegans
2.4e-13
77.8
286
28.3
gsu17810
Galdieria sulphuraria
4.0e-13
77.0
140
35.7
Pp3c26_5120
Physcomitrella patens
1.2e-12
75.5
116
37.1
AT2G38560
Arabidopsis thaliana
5.8e-12
73.2
178
30.9
ENSG00000204219
Homo sapiens
4.2e-10
67.0
328
25.9
ccr08180
Chondrus crispus
4.6e-09
63.5
42
59.5
ccr41980
Chondrus crispus
4.6e-09
63.5
42
59.5
ccr64620
Chondrus crispus
4.6e-09
63.5
42
59.5
ccr128740
Chondrus crispus
4.6e-09
63.5
42
59.5
ccr185340
Chondrus crispus
4.6e-09
63.5
42
59.5
ccr19700
Chondrus crispus
7.8e-09
62.8
42
59.5
FBgn0030663
Drosophila melanogaster
1.0e-08
62.4
163
27.6
ccr09620
Chondrus crispus
3.0e-08
60.8
42
57.1
CM13G03210
Cyanidioschyzon merolae
4.8e-06
53.5
37
54.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing