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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0015G00520
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0015G00520
Aureococcus anophagefferens
0.0e+00
2897.5
1590
100.0
AA0015G00490
Aureococcus anophagefferens
1.6e-143
512.7
260
94.2
Sro773_g200410
Seminavis robusta
1.6e-93
346.7
635
38.6
Naga_100067g7
Nannochloropsis gaditana
1.1e-89
334.0
627
34.6
ptri80280
Phaeodactylum tricornutum
4.0e-89
332.0
630
34.6
fso41110
Fistulifera solaris
4.4e-88
328.6
643
38.4
fso181940
Fistulifera solaris
1.7e-87
326.6
643
37.9
Sro944_g222890
Seminavis robusta
9.2e-86
320.9
642
36.4
CC00G33490
Cyclotella cryptica
3.5e-85
318.9
639
34.9
gene3215
Fragilariopsis cylindrus
5.0e-84
315.1
617
33.1
ps00G126120
Pseudo-nitzschia multiseries
6.6e-84
314.7
625
36.8
ENSG00000132383
Homo sapiens
1.8e-81
306.6
618
32.8
tps198210
Thalassiosira pseudonana
7.5e-80
301.2
610
33.6
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
3.7e-79
298.9
632
35.3
FBgn0010173
Drosophila melanogaster
3.4e-72
275.8
608
33.4
AA0022G00030
Aureococcus anophagefferens
5.8e-72
275.0
374
43.3
YAR007C
Saccharomyces cerevisiae strain S288C
2.9e-71
272.7
447
35.3
gene19869
Fragilariopsis cylindrus
2.3e-68
263.1
635
30.7
tho401580
Thalassiosira oceanica
4.3e-67
258.8
447
35.8
SPBC660.13c
Schizosaccharomyces pombe
5.6e-67
258.5
620
31.9
Pp3c1_20770
Physcomitrella patens
1.2e-66
257.3
446
33.9
AT4G19130
Arabidopsis thaliana
2.8e-66
256.1
673
29.6
AT5G45400
Arabidopsis thaliana
4.7e-66
255.4
451
34.8
AT2G06510
Arabidopsis thaliana
1.1e-65
254.2
638
31.2
sya00G143960
Synedra acus
1.1e-65
254.2
649
31.1
Pp3c23_16880
Physcomitrella patens
1.8e-65
253.4
695
28.2
sya00G127980
Synedra acus
5.2e-65
251.9
649
28.8
AA0005G01410
Aureococcus anophagefferens
3.4e-64
249.2
238
50.8
Pp3c20_10450
Physcomitrella patens
3.4e-64
249.2
705
27.9
AT5G61000
Arabidopsis thaliana
1.5e-56
223.8
442
32.8
AT5G08020
Arabidopsis thaliana
1.7e-55
220.3
445
31.9
Naga_100043g8
Nannochloropsis gaditana
2.9e-55
219.5
400
36.8
ccr116080
Chondrus crispus
1.1e-54
217.6
643
30.3
emh367780
Emiliania huxleyi
8.7e-52
208.0
332
40.1
gsu10940
Galdieria sulphuraria
1.9e-51
206.8
650
25.2
Cre17.g718850
Chlamydomonas reinhardtii
2.1e-50
203.4
469
32.0
CM03G01230
Cyanidioschyzon merolae
3.1e-49
199.5
626
29.2
Ec-01_007080
Ectocarpus siliculosus
1.3e-47
194.1
389
33.7
emh378110
Emiliania huxleyi
2.3e-44
183.3
272
41.9
emh244200
Emiliania huxleyi
8.2e-42
174.9
462
29.7
CM15G01810
Cyanidioschyzon merolae
2.6e-40
169.9
314
34.7
Cre16.g651000
Chlamydomonas reinhardtii
1.1e-38
164.5
622
29.3
WBGene00017546
Caenorhabditis elegans
3.9e-36
156.0
430
27.7
emh82610
Emiliania huxleyi
6.7e-36
155.2
625
25.4
emh418280
Emiliania huxleyi
1.1e-35
154.5
625
25.4
gsu75660
Galdieria sulphuraria
2.2e-34
150.2
301
31.9
CC00G72840
Cyclotella cryptica
3.4e-32
142.9
327
31.2
tps37640
Thalassiosira pseudonana
5.5e-30
135.6
295
31.5
SPBC776.05
Schizosaccharomyces pombe
2.9e-23
113.2
298
29.5
pte570770
Paramecium tetraurelia
1.8e-20
104.0
437
22.7
pte565200
Paramecium tetraurelia
1.5e-19
100.9
447
23.0
AT5G35460
Arabidopsis thaliana
9.7e-19
98.2
297
27.3
Cre03.g207351
Chlamydomonas reinhardtii
9.7e-19
98.2
323
28.5
Pp3c2_27340
Physcomitrella patens
1.7e-18
97.4
302
25.8
emh762180
Emiliania huxleyi
9.1e-17
91.7
307
27.4
Pp3c3_9180
Physcomitrella patens
3.4e-16
89.7
298
25.5
pte664000
Paramecium tetraurelia
1.9e-14
84.0
438
23.1
YGR149W
Saccharomyces cerevisiae strain S288C
5.2e-12
75.9
279
25.4
pte703010
Paramecium tetraurelia
2.6e-11
73.6
435
22.5
AA0003G02890
Aureococcus anophagefferens
5.3e-09
65.9
110
32.7
emh278560
Emiliania huxleyi
1.3e-07
61.2
98
33.7
Sro1193_g251220
Seminavis robusta
5.0e-07
59.3
135
31.9
Cre14.g620200
Chlamydomonas reinhardtii
2.5e-06
57.0
101
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing