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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0014G01350
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0014G01350
Aureococcus anophagefferens
0.0e+00
2985.7
1611
100.0
Ec-10_004770
Ectocarpus siliculosus
9.4e-272
938.7
1826
38.2
PSNMU-V1.4_AUG-EV-PASAV3_0016430
Pseudo-nitzschia multistriata
1.4e-254
881.7
1692
39.1
ptri243920
Phaeodactylum tricornutum
3.7e-252
873.6
1726
39.8
tps163230
Thalassiosira pseudonana
3.5e-250
867.1
1684
37.2
ps00G19120
Pseudo-nitzschia multiseries
1.9e-243
844.7
1702
38.8
gene13677
Fragilariopsis cylindrus
2.3e-241
837.8
1693
38.2
fso164920
Fistulifera solaris
2.0e-237
824.7
1702
40.1
sya00G37900
Synedra acus
1.7e-236
821.6
1716
36.9
Sro258_g101130
Seminavis robusta
2.2e-236
821.2
1533
40.7
fso138970
Fistulifera solaris
1.9e-232
808.1
1703
40.9
tho45800
Thalassiosira oceanica
1.9e-232
808.1
1497
39.6
SPBC4C3.05c
Schizosaccharomyces pombe
8.4e-228
792.7
1707
34.4
CC00G204810
Cyclotella cryptica
1.1e-222
775.8
1145
43.6
YOR341W
Saccharomyces cerevisiae strain S288C
1.3e-209
732.3
1694
36.4
ENSG00000068654
Homo sapiens
7.9e-202
706.4
1759
32.9
Pp3c14_2730
Physcomitrella patens
1.5e-200
702.2
1754
34.0
Cre12.g529600
Chlamydomonas reinhardtii
7.4e-200
699.9
1553
36.1
Naga_100002g17
Nannochloropsis gaditana
2.3e-193
678.3
1302
40.0
FBgn0019938
Drosophila melanogaster
1.2e-186
656.0
1469
37.2
AT3G57660
Arabidopsis thaliana
2.6e-173
611.7
1724
34.4
WBGene00012999
Caenorhabditis elegans
3.5e-173
611.3
1485
33.7
emh594530
Emiliania huxleyi
3.8e-172
607.8
1582
36.7
pte441120
Paramecium tetraurelia
5.3e-166
587.4
1362
35.8
gsu26130
Galdieria sulphuraria
1.6e-162
575.9
1762
30.6
CM11G00360
Cyanidioschyzon merolae
3.0e-161
571.6
1698
30.7
ccr187500
Chondrus crispus
1.4e-153
546.2
1066
35.9
AA0001G02470
Aureococcus anophagefferens
6.6e-108
394.4
1000
33.2
ENSG00000148606
Homo sapiens
1.9e-102
376.3
1405
26.8
CM18G02240
Cyanidioschyzon merolae
7.9e-101
370.9
1412
27.3
Cre16.g680900
Chlamydomonas reinhardtii
1.9e-99
366.3
1419
27.1
ccr153320
Chondrus crispus
5.6e-99
364.8
1428
26.9
Naga_100030g12
Nannochloropsis gaditana
3.1e-97
359.0
1422
26.9
Pp3c14_14540
Physcomitrella patens
3.1e-97
359.0
1020
30.1
SPBC28F2.12
Schizosaccharomyces pombe
1.2e-96
357.1
974
30.6
AT4G35800
Arabidopsis thaliana
3.4e-96
355.5
1018
29.4
Ec-25_003070
Ectocarpus siliculosus
4.5e-96
355.1
1436
27.6
FBgn0003277
Drosophila melanogaster
1.3e-95
353.6
1442
25.9
tps50760
Thalassiosira pseudonana
3.8e-95
352.1
1423
26.2
gsu134780
Galdieria sulphuraria
6.4e-95
351.3
1029
30.9
YDL140C
Saccharomyces cerevisiae strain S288C
1.4e-94
350.1
996
30.1
CC00G177750
Cyclotella cryptica
3.2e-94
349.0
1034
30.1
WBGene00000123
Caenorhabditis elegans
2.7e-93
345.9
1415
26.2
WBGene00004411
Caenorhabditis elegans
2.7e-93
345.9
1411
26.4
CM07G01790
Cyanidioschyzon merolae
2.7e-93
345.9
1414
27.4
tho55880
Thalassiosira oceanica
4.6e-93
345.1
1423
26.3
Pp3c1_32300
Physcomitrella patens
6.0e-93
344.7
1020
29.3
tps176200
Thalassiosira pseudonana
6.0e-93
344.7
1034
29.6
FBgn0030687
Drosophila melanogaster
1.0e-92
344.0
991
30.4
Pp3c17_4860
Physcomitrella patens
1.0e-92
344.0
982
29.6
Cre03.g165750
Chlamydomonas reinhardtii
1.3e-92
343.6
1400
27.6
YOR116C
Saccharomyces cerevisiae strain S288C
1.3e-92
343.6
1445
26.0
PSNMU-V1.4_AUG-EV-PASAV3_0047100
Pseudo-nitzschia multistriata
2.3e-92
342.8
1011
30.5
CC00G54130
Cyclotella cryptica
3.0e-92
342.4
1415
26.4
sya00G188490
Synedra acus
6.7e-92
341.3
1047
30.0
ps00G65250
Pseudo-nitzschia multiseries
8.7e-92
340.9
989
30.8
AA0005G03230
Aureococcus anophagefferens
1.5e-91
340.1
1413
27.6
PSNMU-V1.4_AUG-EV-PASAV3_0050080
Pseudo-nitzschia multistriata
5.6e-91
338.2
998
29.9
Sro544_g163690
Seminavis robusta
7.4e-91
337.8
1434
26.9
ps00G21060
Pseudo-nitzschia multiseries
1.3e-90
337.0
1424
26.8
gene13229
Fragilariopsis cylindrus
2.8e-90
335.9
1415
25.6
fso05470
Fistulifera solaris
4.8e-90
335.1
1005
29.1
SPBC651.08c
Schizosaccharomyces pombe
4.8e-90
335.1
974
30.8
Naga_100006g66
Nannochloropsis gaditana
6.2e-90
334.7
1010
28.5
fso144930
Fistulifera solaris
1.4e-89
333.6
1000
30.0
ENSG00000181222
Homo sapiens
1.4e-89
333.6
1419
25.9
fso96020
Fistulifera solaris
2.4e-89
332.8
1005
29.2
fso58660
Fistulifera solaris
9.0e-89
330.9
1000
29.9
Sro219_g090360
Seminavis robusta
1.5e-88
330.1
992
30.7
ptri48210
Phaeodactylum tricornutum
3.4e-88
328.9
1430
25.7
ptri101600
Phaeodactylum tricornutum
6.5e-87
324.7
976
29.8
AT5G60040
Arabidopsis thaliana
3.2e-86
322.4
980
29.2
emh131970
Emiliania huxleyi
5.5e-86
321.6
1013
29.7
Ec-08_001270
Ectocarpus siliculosus
7.1e-86
321.2
992
28.4
gene18199
Fragilariopsis cylindrus
3.3e-83
312.4
1005
29.3
emh570500
Emiliania huxleyi
1.3e-82
310.5
988
28.7
emh568600
Emiliania huxleyi
2.8e-82
309.3
1029
29.8
emh189320
Emiliania huxleyi
3.7e-82
308.9
1004
30.0
ccr145560
Chondrus crispus
8.2e-82
307.8
1404
25.7
pte119430
Paramecium tetraurelia
5.5e-78
295.0
1392
25.4
pte20810
Paramecium tetraurelia
4.6e-77
292.0
1394
25.3
pte131270
Paramecium tetraurelia
5.3e-73
278.5
1449
24.3
tho152540
Thalassiosira oceanica
4.3e-67
258.8
840
29.0
gsu102470
Galdieria sulphuraria
8.5e-55
218.0
516
31.4
sya00G125340
Synedra acus
3.3e-51
206.1
453
31.1
gsu08500
Galdieria sulphuraria
2.2e-34
150.2
645
24.7
Naga_100002g18
Nannochloropsis gaditana
6.3e-34
148.7
143
57.3
ccr187520
Chondrus crispus
3.0e-23
113.2
148
42.6
Pp3c17_3180
Physcomitrella patens
2.5e-22
110.2
672
23.1
gsu09220
Galdieria sulphuraria
6.8e-20
102.1
251
28.3
syaC00750
Synedra acus
2.0e-19
100.5
334
27.2
Pp3c15_4150
Physcomitrella patens
3.4e-19
99.8
580
22.8
psmC00820
Pseudo-nitzschia multiseries
7.5e-19
98.6
317
26.2
ptri_chlor01190
Phaeodactylum tricornutum
7.5e-19
98.6
334
26.9
fsoC01730
Fistulifera solaris
1.3e-18
97.8
317
26.8
gsu_chlor00G00980
Galdieria sulphuraria
1.7e-18
97.4
316
27.5
tpsC00730
Thalassiosira pseudonana
1.7e-18
97.4
334
26.6
CYCR_CHL00G00330
Cyclotella cryptica
3.7e-18
96.3
337
26.7
AACG00240
Aureococcus anophagefferens
8.3e-18
95.1
320
27.5
ccr_chlor00G01370
Chondrus crispus
1.4e-17
94.4
314
26.8
sya00G208710
Synedra acus
2.4e-17
93.6
324
27.5
thoC00310
Thalassiosira oceanica
4.1e-17
92.8
334
26.0
CMCG02190
Cyanidioschyzon merolae
9.2e-17
91.7
316
26.6
ptri243940
Phaeodactylum tricornutum
1.6e-16
90.9
75
57.3
ATCG00180
Arabidopsis thaliana
4.6e-16
89.4
316
26.6
ps00G77360
Pseudo-nitzschia multiseries
4.6e-16
89.4
316
26.9
Pp3c15_5270
Physcomitrella patens
6.0e-16
89.0
606
22.1
AT2G40030
Arabidopsis thaliana
7.8e-16
88.6
314
23.2
sya00G111540
Synedra acus
3.0e-15
86.7
255
28.2
Pp3c15_19420
Physcomitrella patens
1.5e-14
84.3
246
25.2
AT1G63020
Arabidopsis thaliana
7.3e-14
82.0
634
23.5
Pp3c16_6060
Physcomitrella patens
8.1e-13
78.6
244
25.0
esiC01340
Ectocarpus siliculosus
1.1e-12
78.2
250
25.6
sya00G07660
Synedra acus
1.8e-12
77.4
66
62.1
ngaC01220
Nannochloropsis gaditana
2.3e-12
77.0
249
26.5
Pp3c1_10580
Physcomitrella patens
2.3e-12
77.0
92
40.2
Pp3c9_17810
Physcomitrella patens
2.3e-12
77.0
229
25.8
Pp3c10_11540
Physcomitrella patens
1.2e-11
74.7
234
24.4
Pp3c1_270
Physcomitrella patens
5.8e-11
72.4
92
39.1
Pp3c5_1410
Physcomitrella patens
6.4e-10
68.9
92
35.9
Pp3c8_4620
Physcomitrella patens
2.4e-09
67.0
97
36.1
Pp3s67_110
Physcomitrella patens
4.1e-09
66.2
112
33.9
Pp3c21_8550
Physcomitrella patens
2.1e-08
63.9
97
37.1
Pp3c11_15730
Physcomitrella patens
1.0e-07
61.6
107
32.7
Pp3c5_18540
Physcomitrella patens
1.7e-07
60.8
119
31.9
Pp3c11_17080
Physcomitrella patens
2.3e-07
60.5
80
41.2
fso99180
Fistulifera solaris
3.0e-07
60.1
74
40.5
Pp3c9_12713
Physcomitrella patens
1.9e-06
57.4
79
39.2
Pp3c4_14790
Physcomitrella patens
4.3e-06
56.2
130
33.8
Pp3c25_15150
Physcomitrella patens
5.6e-06
55.8
127
31.5
Pp3c3_29710
Physcomitrella patens
9.5e-06
55.1
79
39.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (6 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (7 genes)
Physcomitrella patens (24 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing