Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0013G02420
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0013G02420
Aureococcus anophagefferens
0.0e+00
2320.4
1259
100.0
tps146090
Thalassiosira pseudonana
1.3e-53
213.8
349
40.7
sya00G220660
Synedra acus
1.4e-52
210.3
315
42.5
ptri206450
Phaeodactylum tricornutum
2.4e-52
209.5
340
40.9
Sro2587_g331940
Seminavis robusta
6.9e-52
208.0
324
42.3
gene17868
Fragilariopsis cylindrus
2.6e-51
206.1
323
39.0
Sro751_g197080
Seminavis robusta
1.7e-50
203.4
329
38.6
fso50750
Fistulifera solaris
2.1e-48
196.4
318
41.2
fso108570
Fistulifera solaris
6.0e-48
194.9
352
39.5
ps00G99320
Pseudo-nitzschia multiseries
2.0e-43
179.9
320
36.2
PSNMU-V1.4_AUG-EV-PASAV3_0002940
Pseudo-nitzschia multistriata
5.8e-43
178.3
322
39.1
CC00G58560
Cyclotella cryptica
2.2e-42
176.4
264
42.4
tho443840
Thalassiosira oceanica
2.5e-41
172.9
265
42.6
sya00G39140
Synedra acus
3.2e-41
172.6
252
43.3
Ec-22_001140
Ectocarpus siliculosus
2.0e-19
100.1
161
37.3
Ec-24_001730
Ectocarpus siliculosus
1.1e-12
77.8
177
32.2
AA0004G03170
Aureococcus anophagefferens
4.7e-08
62.4
53
50.9
AA0010G02590
Aureococcus anophagefferens
6.1e-08
62.0
174
30.5
AA0001G02010
Aureococcus anophagefferens
8.8e-07
58.2
56
51.8
AA0016G00150
Aureococcus anophagefferens
1.5e-06
57.4
89
42.7
WBGene00015861
Caenorhabditis elegans
2.6e-06
56.6
138
31.9
AA0041G00310
Aureococcus anophagefferens
3.3e-06
56.2
123
35.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing