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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0013G01930
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0013G01930
Aureococcus anophagefferens
4.5e-176
618.6
334
100.0
emh395430
Emiliania huxleyi
1.2e-67
258.5
330
50.0
gsu88330
Galdieria sulphuraria
2.2e-53
211.1
323
42.1
gsu70990
Galdieria sulphuraria
2.9e-50
200.7
318
41.2
ENSG00000115129
Homo sapiens
2.1e-48
194.5
324
39.5
ccr191420
Chondrus crispus
3.5e-43
177.2
331
38.4
AT4G21580
Arabidopsis thaliana
4.5e-43
176.8
331
37.8
CM19G02290
Cyanidioschyzon merolae
2.3e-39
164.5
338
37.6
sya00G44440
Synedra acus
1.5e-38
161.8
313
39.3
ps00G40910
Pseudo-nitzschia multiseries
2.0e-38
161.4
333
38.7
Pp3c12_2540
Physcomitrella patens
3.7e-37
157.1
318
35.2
pte771810
Paramecium tetraurelia
1.6e-24
115.2
324
29.6
emh11390
Emiliania huxleyi
4.7e-24
113.6
130
53.8
pte399130
Paramecium tetraurelia
8.0e-24
112.8
314
31.5
gene173
Fragilariopsis cylindrus
4.1e-20
100.5
322
32.0
emh301610
Emiliania huxleyi
7.7e-19
96.3
314
35.4
emh113560
Emiliania huxleyi
7.7e-19
96.3
314
35.4
Cre16.g674050
Chlamydomonas reinhardtii
1.0e-18
95.9
311
30.5
ENSG00000116791
Homo sapiens
1.2e-16
89.0
225
31.6
AA0014G01250
Aureococcus anophagefferens
1.6e-16
88.6
281
34.5
ENSG00000171724
Homo sapiens
3.6e-16
87.4
215
32.6
Ec-17_002760
Ectocarpus siliculosus
8.9e-15
82.8
313
31.0
gene6780
Fragilariopsis cylindrus
1.2e-14
82.4
223
32.7
SPCC1442.16c
Schizosaccharomyces pombe
2.0e-14
81.6
322
30.4
Sro19_g013310
Seminavis robusta
3.4e-14
80.9
167
39.5
SPBC1773.06c
Schizosaccharomyces pombe
5.7e-14
80.1
339
26.5
Naga_100001g49
Nannochloropsis gaditana
1.3e-13
79.0
325
27.4
Pp3c7_23980
Physcomitrella patens
2.2e-13
78.2
214
33.6
emh170150
Emiliania huxleyi
3.7e-13
77.4
318
31.1
AA0006G05520
Aureococcus anophagefferens
4.9e-13
77.0
332
30.1
Naga_101380g1
Nannochloropsis gaditana
4.9e-13
77.0
212
34.4
Pp3c3_23630
Physcomitrella patens
6.3e-13
76.6
252
31.0
Pp3c3_23550
Physcomitrella patens
6.3e-13
76.6
252
31.0
Cre10.g449750
Chlamydomonas reinhardtii
8.3e-13
76.3
216
36.1
ENSG00000108828
Homo sapiens
1.1e-12
75.9
321
28.0
sya00G116590
Synedra acus
1.8e-12
75.1
219
33.3
Sro355_g125180
Seminavis robusta
5.4e-12
73.6
191
35.6
Sro908_g218850
Seminavis robusta
5.4e-12
73.6
218
32.1
Naga_100061g29
Nannochloropsis gaditana
9.2e-12
72.8
255
30.2
Naga_100093g2
Nannochloropsis gaditana
1.2e-11
72.4
320
25.9
Cre16.g677950
Chlamydomonas reinhardtii
1.6e-11
72.0
308
31.2
Naga_100028g49
Nannochloropsis gaditana
4.5e-11
70.5
224
29.0
Naga_100007g48
Nannochloropsis gaditana
4.5e-11
70.5
180
30.6
sya00G248880
Synedra acus
1.0e-10
69.3
246
30.9
emh658870
Emiliania huxleyi
1.3e-10
68.9
211
34.1
ps00G191200
Pseudo-nitzschia multiseries
2.9e-10
67.8
201
35.8
fso193860
Fistulifera solaris
8.6e-10
66.2
228
30.7
emh339390
Emiliania huxleyi
1.1e-09
65.9
233
30.9
Sro127_g060910
Seminavis robusta
1.1e-09
65.9
217
34.6
CC00G11550
Cyclotella cryptica
1.5e-09
65.5
345
25.5
AT1G23740
Arabidopsis thaliana
1.9e-09
65.1
191
36.1
ptri103560
Phaeodactylum tricornutum
1.9e-09
65.1
346
29.8
tps96320
Thalassiosira pseudonana
1.9e-09
65.1
155
32.3
Sro911_g219180
Seminavis robusta
5.6e-09
63.5
204
33.3
sya00G260320
Synedra acus
9.5e-09
62.8
341
27.0
Sro28_g018870
Seminavis robusta
1.2e-08
62.4
209
27.8
ptri207500
Phaeodactylum tricornutum
2.1e-08
61.6
341
27.3
tho380160
Thalassiosira oceanica
2.1e-08
61.6
162
32.7
YBR046C
Saccharomyces cerevisiae strain S288C
2.8e-08
61.2
234
30.8
Pp3c16_1190
Physcomitrella patens
3.6e-08
60.8
309
24.3
AT3G56460
Arabidopsis thaliana
6.1e-08
60.1
204
27.9
emh292360
Emiliania huxleyi
6.1e-08
60.1
206
30.6
Pp3c3_23410
Physcomitrella patens
6.1e-08
60.1
174
36.2
AT1G49670
Arabidopsis thaliana
8.0e-08
59.7
342
26.0
WBGene00009554
Caenorhabditis elegans
8.0e-08
59.7
234
30.3
Sro1688_g291250
Seminavis robusta
8.0e-08
59.7
168
39.3
tho08540
Thalassiosira oceanica
1.4e-07
58.9
152
34.9
Pp3c2_37490
Physcomitrella patens
1.8e-07
58.5
211
30.3
Pp3c2_37350
Physcomitrella patens
1.8e-07
58.5
211
30.3
sya00G261750
Synedra acus
1.8e-07
58.5
341
27.3
WBGene00044305
Caenorhabditis elegans
2.3e-07
58.2
264
29.2
emh418400
Emiliania huxleyi
2.3e-07
58.2
314
28.0
ENSG00000169710
Homo sapiens
2.3e-07
58.2
333
25.5
Pp3c14_1550
Physcomitrella patens
3.1e-07
57.8
226
30.1
gene9213
Fragilariopsis cylindrus
4.0e-07
57.4
175
34.3
AT3G15090
Arabidopsis thaliana
5.2e-07
57.0
209
29.7
emh739490
Emiliania huxleyi
6.8e-07
56.6
309
29.4
emh59070
Emiliania huxleyi
6.8e-07
56.6
314
27.7
Sro23_g015730
Seminavis robusta
6.8e-07
56.6
249
28.1
CC00G210560
Cyclotella cryptica
8.9e-07
56.2
167
32.3
ENSG00000205758
Homo sapiens
8.9e-07
56.2
242
26.9
Pp3s155_50
Physcomitrella patens
8.9e-07
56.2
176
30.1
AT4G13010
Arabidopsis thaliana
1.2e-06
55.8
213
29.6
ps00G147920
Pseudo-nitzschia multiseries
1.2e-06
55.8
288
27.4
AA0031G00520
Aureococcus anophagefferens
2.0e-06
55.1
338
31.4
CC00G202220
Cyclotella cryptica
5.8e-06
53.5
172
29.1
Pp3c11_25890
Physcomitrella patens
5.8e-06
53.5
338
25.7
Sro707_g190550
Seminavis robusta
9.8e-06
52.8
207
29.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (6 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (11 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (9 genes)
Synedra acus (5 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing