Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0012G02510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0012G02510
Aureococcus anophagefferens
2.0e-292
1005.7
505
100.0
emh596280
Emiliania huxleyi
3.0e-155
550.1
518
57.5
Ec-24_001420
Ectocarpus siliculosus
1.5e-138
494.6
517
52.0
Naga_100859g1
Nannochloropsis gaditana
1.5e-127
458.0
522
46.9
ccr21440
Chondrus crispus
2.9e-118
427.2
503
47.3
Cre17.g734900
Chlamydomonas reinhardtii
1.2e-116
421.8
525
45.3
ptri152360
Phaeodactylum tricornutum
9.0e-104
379.0
519
42.2
sya00G102750
Synedra acus
6.5e-102
372.9
504
40.9
PSNMU-V1.4_AUG-EV-PASAV3_0116580
Pseudo-nitzschia multistriata
7.2e-101
369.4
511
39.9
Sro937_g222220
Seminavis robusta
9.7e-98
359.0
512
41.6
tps224730
Thalassiosira pseudonana
4.5e-95
350.1
527
38.5
fso93470
Fistulifera solaris
4.2e-93
343.6
512
39.3
tho88780
Thalassiosira oceanica
4.7e-92
340.1
476
41.2
fso158920
Fistulifera solaris
2.3e-91
337.8
511
38.7
CC00G134610
Cyclotella cryptica
2.6e-82
307.8
353
46.7
gene10083
Fragilariopsis cylindrus
2.0e-55
218.4
205
48.8
gene9478
Fragilariopsis cylindrus
3.3e-37
157.9
205
38.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing