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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0011G00470
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0011G00470
Aureococcus anophagefferens
2.6e-203
709.1
346
100.0
ptri155270
Phaeodactylum tricornutum
3.8e-45
183.7
394
33.8
fso104330
Fistulifera solaris
4.7e-43
176.8
381
32.5
fso05270
Fistulifera solaris
6.7e-42
172.9
330
35.5
gene11396
Fragilariopsis cylindrus
2.0e-41
171.4
206
42.2
ps00G15330
Pseudo-nitzschia multiseries
2.0e-41
171.4
381
33.1
Sro1822_g299840
Seminavis robusta
2.6e-41
171.0
405
30.4
PSNMU-V1.4_AUG-EV-PASAV3_0036560
Pseudo-nitzschia multistriata
1.3e-40
168.7
262
38.5
Naga_100059g27
Nannochloropsis gaditana
7.7e-38
159.5
356
34.3
Ec-14_000100
Ectocarpus siliculosus
1.0e-37
159.1
323
32.5
tho120420
Thalassiosira oceanica
1.1e-31
139.0
408
30.4
CC00G160920
Cyclotella cryptica
1.3e-29
132.1
235
36.6
sya00G263200
Synedra acus
3.2e-28
127.5
217
38.2
gsu115840
Galdieria sulphuraria
1.3e-24
115.5
196
35.2
Pp3c3_2860
Physcomitrella patens
7.7e-22
106.3
332
28.6
FBgn0033474
Drosophila melanogaster
2.0e-17
91.7
165
35.8
ENSG00000104219
Homo sapiens
1.3e-16
89.0
160
33.1
AT5G04270
Arabidopsis thaliana
6.4e-16
86.7
176
29.5
emh618580
Emiliania huxleyi
4.1e-15
84.0
339
28.3
emh407000
Emiliania huxleyi
4.1e-15
84.0
339
28.3
ENSG00000102383
Homo sapiens
5.4e-15
83.6
160
31.9
Cre09.g394050
Chlamydomonas reinhardtii
1.2e-14
82.4
184
32.6
Cre03.g207502
Chlamydomonas reinhardtii
2.0e-14
81.6
339
23.3
AT4G22750
Arabidopsis thaliana
7.8e-14
79.7
168
33.3
AT4G22753
Arabidopsis thaliana
7.8e-14
79.7
168
33.3
WBGene00014075
Caenorhabditis elegans
7.8e-14
79.7
185
29.2
CC00G132580
Cyclotella cryptica
3.3e-12
74.3
156
31.4
emh634100
Emiliania huxleyi
3.3e-12
74.3
193
31.1
pte596200
Paramecium tetraurelia
1.2e-11
72.4
154
32.5
Sro648_g181080
Seminavis robusta
1.6e-11
72.0
68
44.1
AT3G26935
Arabidopsis thaliana
2.8e-11
71.2
164
28.0
ccr45760
Chondrus crispus
3.6e-11
70.9
215
32.1
Pp3c14_14250
Physcomitrella patens
4.7e-11
70.5
161
29.8
ptri202410
Phaeodactylum tricornutum
1.0e-10
69.3
323
26.0
emh13610
Emiliania huxleyi
1.4e-10
68.9
85
42.4
AT5G41060
Arabidopsis thaliana
2.3e-10
68.2
164
26.2
WBGene00007637
Caenorhabditis elegans
2.3e-10
68.2
195
29.2
CM04G01190
Cyanidioschyzon merolae
3.1e-10
67.8
172
33.7
Naga_100015g33
Nannochloropsis gaditana
3.1e-10
67.8
67
40.3
AT3G09320
Arabidopsis thaliana
4.0e-10
67.4
173
26.6
Pp3c14_14940
Physcomitrella patens
4.0e-10
67.4
193
27.5
Pp3c17_5900
Physcomitrella patens
5.2e-10
67.0
193
27.5
AT5G50020
Arabidopsis thaliana
8.9e-10
66.2
159
29.6
gsu141890
Galdieria sulphuraria
8.9e-10
66.2
162
30.9
AT3G48760
Arabidopsis thaliana
1.2e-09
65.9
159
27.0
FBgn0027453
Drosophila melanogaster
1.5e-09
65.5
173
28.3
AT4G24630
Arabidopsis thaliana
4.4e-09
63.9
160
27.5
sya00G223090
Synedra acus
5.8e-09
63.5
54
46.3
tho205300
Thalassiosira oceanica
2.9e-08
61.2
229
27.9
Pp3c13_19220
Physcomitrella patens
3.7e-08
60.8
72
38.9
Ec-08_001700
Ectocarpus siliculosus
4.9e-08
60.5
146
28.8
Sro2062_g313050
Seminavis robusta
8.3e-08
59.7
52
46.2
AT2G40990
Arabidopsis thaliana
1.1e-07
59.3
164
26.2
WBGene00018009
Caenorhabditis elegans
1.1e-07
59.3
161
28.6
Pp3c16_1360
Physcomitrella patens
1.4e-07
58.9
194
27.3
Cre01.g007200
Chlamydomonas reinhardtii
2.4e-07
58.2
189
28.6
Ec-00_009110
Ectocarpus siliculosus
2.4e-07
58.2
125
26.4
fso86290
Fistulifera solaris
2.4e-07
58.2
59
40.7
pte337120
Paramecium tetraurelia
2.4e-07
58.2
135
30.4
pte373970
Paramecium tetraurelia
2.4e-07
58.2
135
30.4
pte564660
Paramecium tetraurelia
3.2e-07
57.8
167
26.3
ptri223880
Phaeodactylum tricornutum
4.1e-07
57.4
66
39.4
gene16870
Fragilariopsis cylindrus
5.4e-07
57.0
68
36.8
ENSG00000171307
Homo sapiens
5.4e-07
57.0
208
27.4
fso108970
Fistulifera solaris
7.0e-07
56.6
48
43.8
AT3G56920
Arabidopsis thaliana
9.2e-07
56.2
164
26.8
pte669860
Paramecium tetraurelia
9.2e-07
56.2
138
29.7
CC00G116540
Cyclotella cryptica
1.6e-06
55.5
38
57.9
AT5G05070
Arabidopsis thaliana
2.0e-06
55.1
164
26.2
CC00G50270
Cyclotella cryptica
2.0e-06
55.1
91
36.3
FBgn0260941
Drosophila melanogaster
2.0e-06
55.1
154
30.5
gene13182
Fragilariopsis cylindrus
2.7e-06
54.7
153
32.0
CM19G01180
Cyanidioschyzon merolae
3.5e-06
54.3
163
31.3
ps00G08910
Pseudo-nitzschia multiseries
3.5e-06
54.3
91
35.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (12 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing