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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0009G01560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0009G01560
Aureococcus anophagefferens
6.4e-110
398.3
223
100.0
AA0006G04240
Aureococcus anophagefferens
8.3e-17
89.0
178
41.6
ps00G12600
Pseudo-nitzschia multiseries
2.5e-13
77.4
208
41.8
PSNMU-V1.4_AUG-EV-PASAV3_0100580
Pseudo-nitzschia multistriata
5.5e-13
76.3
208
41.3
ps00G95870
Pseudo-nitzschia multiseries
9.4e-13
75.5
217
41.5
gene13616
Fragilariopsis cylindrus
1.6e-12
74.7
208
41.3
fso61680
Fistulifera solaris
1.6e-12
74.7
219
34.7
fso165890
Fistulifera solaris
1.6e-12
74.7
219
34.7
Sro1286_g259410
Seminavis robusta
1.6e-12
74.7
208
40.4
ptri143090
Phaeodactylum tricornutum
8.0e-12
72.4
208
34.6
fso05110
Fistulifera solaris
1.4e-11
71.6
204
37.3
fso104160
Fistulifera solaris
1.4e-11
71.6
201
36.3
fso139010
Fistulifera solaris
3.0e-11
70.5
182
41.2
gene10836
Fragilariopsis cylindrus
4.0e-11
70.1
203
42.9
sya00G55690
Synedra acus
5.2e-11
69.7
186
42.5
CC00G96920
Cyclotella cryptica
6.8e-11
69.3
197
28.4
fso164870
Fistulifera solaris
8.8e-11
68.9
182
41.2
sya00G168210
Synedra acus
8.8e-11
68.9
203
39.4
sya00G248730
Synedra acus
8.8e-11
68.9
203
39.4
CC00G20570
Cyclotella cryptica
2.0e-10
67.8
206
41.3
CC00G164840
Cyclotella cryptica
3.4e-10
67.0
206
38.8
ptri59760
Phaeodactylum tricornutum
7.5e-10
65.9
181
43.6
gene11448
Fragilariopsis cylindrus
1.7e-09
64.7
200
38.0
ptri56080
Phaeodactylum tricornutum
1.7e-09
64.7
200
35.0
Sro171_g075780
Seminavis robusta
8.3e-09
62.4
184
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0119810
Pseudo-nitzschia multistriata
3.1e-08
60.5
135
34.8
tho206320
Thalassiosira oceanica
5.4e-08
59.7
188
29.8
tps57930
Thalassiosira pseudonana
7.0e-08
59.3
134
36.6
sya00G241130
Synedra acus
2.0e-07
57.8
195
39.0
Sro230_g093350
Seminavis robusta
2.9e-06
53.9
200
37.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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