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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0009G01510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0009G01510
Aureococcus anophagefferens
0.0e+00
2379.4
1489
100.0
AA0069G00070
Aureococcus anophagefferens
5.1e-25
119.0
107
57.9
AA0010G02520
Aureococcus anophagefferens
5.9e-21
105.5
107
54.2
AA0003G02590
Aureococcus anophagefferens
5.5e-19
99.0
99
55.6
Naga_100307g6
Nannochloropsis gaditana
2.6e-16
90.1
76
53.9
CC00G21860
Cyclotella cryptica
4.5e-13
79.3
90
47.8
tho60520
Thalassiosira oceanica
8.5e-12
75.1
104
39.4
ps00G171700
Pseudo-nitzschia multiseries
1.5e-11
74.3
158
31.0
Sro434_g142090
Seminavis robusta
1.5e-11
74.3
115
37.4
gene16934
Fragilariopsis cylindrus
3.6e-10
69.7
130
35.4
CC00G136370
Cyclotella cryptica
1.4e-09
67.8
152
31.6
Sro6_g004910
Seminavis robusta
1.4e-09
67.8
135
34.1
AA0016G00190
Aureococcus anophagefferens
4.0e-09
66.2
90
41.1
AA0005G05200
Aureococcus anophagefferens
5.2e-09
65.9
76
57.9
sya00G224500
Synedra acus
5.2e-09
65.9
71
45.1
Sro2118_g315310
Seminavis robusta
6.7e-09
65.5
54
53.7
fso29050
Fistulifera solaris
8.8e-09
65.1
141
32.6
fso35170
Fistulifera solaris
8.8e-09
65.1
141
32.6
sya00G45420
Synedra acus
2.6e-08
63.5
71
43.7
gene13980
Fragilariopsis cylindrus
3.3e-08
63.2
80
43.8
sya00G17930
Synedra acus
3.3e-08
63.2
95
42.1
fso177520
Fistulifera solaris
5.7e-08
62.4
140
34.3
PSNMU-V1.4_AUG-EV-PASAV3_0087600
Pseudo-nitzschia multistriata
5.7e-08
62.4
148
31.8
fso19250
Fistulifera solaris
7.5e-08
62.0
141
34.0
Sro434_g142120
Seminavis robusta
7.5e-08
62.0
80
42.5
tho130600
Thalassiosira oceanica
7.5e-08
62.0
69
43.5
Ec-05_003600
Ectocarpus siliculosus
1.7e-07
60.8
94
38.3
ptri17350
Phaeodactylum tricornutum
1.7e-07
60.8
91
37.4
ps00G100780
Pseudo-nitzschia multiseries
2.2e-07
60.5
71
43.7
ps00G119460
Pseudo-nitzschia multiseries
2.2e-07
60.5
95
42.1
AA0010G00490
Aureococcus anophagefferens
2.8e-07
60.1
91
38.5
CC00G71550
Cyclotella cryptica
2.8e-07
60.1
71
43.7
gene13093
Fragilariopsis cylindrus
2.8e-07
60.1
95
42.1
fso65340
Fistulifera solaris
2.8e-07
60.1
105
35.2
sya00G80170
Synedra acus
2.8e-07
60.1
76
40.8
sya00G89920
Synedra acus
2.8e-07
60.1
76
40.8
tho216440
Thalassiosira oceanica
2.8e-07
60.1
65
50.8
CC00G152280
Cyclotella cryptica
3.7e-07
59.7
69
44.9
Sro663_g183490
Seminavis robusta
3.7e-07
59.7
53
54.7
sya00G168230
Synedra acus
4.8e-07
59.3
65
49.2
fso64980
Fistulifera solaris
6.3e-07
58.9
53
50.9
Sro514_g157970
Seminavis robusta
6.3e-07
58.9
65
49.2
tps85650
Thalassiosira pseudonana
6.3e-07
58.9
71
42.3
ptri242210
Phaeodactylum tricornutum
8.2e-07
58.5
106
38.7
AA0005G02870
Aureococcus anophagefferens
1.4e-06
57.8
65
49.2
Ec-28_002800
Ectocarpus siliculosus
1.4e-06
57.8
65
47.7
tho189920
Thalassiosira oceanica
1.8e-06
57.4
95
37.9
Sro929_g221290
Seminavis robusta
2.4e-06
57.0
94
39.4
fso52420
Fistulifera solaris
3.1e-06
56.6
95
36.8
Sro64_g036220
Seminavis robusta
4.1e-06
56.2
54
46.3
Sro986_g228100
Seminavis robusta
4.1e-06
56.2
64
43.8
Sro3445_g348110
Seminavis robusta
4.1e-06
56.2
62
45.2
tho125340
Thalassiosira oceanica
4.1e-06
56.2
65
49.2
ptri233410
Phaeodactylum tricornutum
5.3e-06
55.8
95
37.9
CC00G106860
Cyclotella cryptica
7.0e-06
55.5
63
47.6
Sro90_g047360
Seminavis robusta
7.0e-06
55.5
89
36.0
fso161280
Fistulifera solaris
9.1e-06
55.1
104
37.5
PSNMU-V1.4_AUG-EV-PASAV3_0046040
Pseudo-nitzschia multistriata
9.1e-06
55.1
92
40.2
Sro752_g197150
Seminavis robusta
9.1e-06
55.1
95
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (8 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (12 genes)
Synedra acus (6 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing