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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0008G00150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0008G00150
Aureococcus anophagefferens
2.7e-186
652.5
318
100.0
Ec-20_000660
Ectocarpus siliculosus
1.4e-73
278.1
332
46.4
CC00G32390
Cyclotella cryptica
8.0e-66
252.3
342
43.3
AT1G21710
Arabidopsis thaliana
5.0e-60
233.0
305
44.6
ps00G32980
Pseudo-nitzschia multiseries
6.6e-60
232.6
351
44.2
tps190320
Thalassiosira pseudonana
3.6e-58
226.9
282
45.7
Pp3c15_7530
Physcomitrella patens
1.8e-57
224.6
320
42.5
Sro1597_g284850
Seminavis robusta
1.8e-57
224.6
259
46.7
ptri222860
Phaeodactylum tricornutum
2.0e-56
221.1
340
40.0
sya00G65150
Synedra acus
3.4e-56
220.3
342
40.1
Naga_100311g1
Nannochloropsis gaditana
2.2e-55
217.6
210
54.8
fso123310
Fistulifera solaris
6.4e-55
216.1
338
39.3
PSNMU-V1.4_AUG-EV-PASAV3_0092630
Pseudo-nitzschia multistriata
1.4e-54
214.9
257
49.4
CM12G02490
Cyanidioschyzon merolae
1.4e-49
198.4
328
38.4
Cre01.g063632
Chlamydomonas reinhardtii
5.8e-48
193.0
419
35.6
ENSG00000114026
Homo sapiens
5.8e-48
193.0
301
41.2
gene16590
Fragilariopsis cylindrus
4.1e-46
186.8
278
42.4
gsu49240
Galdieria sulphuraria
1.0e-44
182.2
307
35.2
YML060W
Saccharomyces cerevisiae strain S288C
8.7e-36
152.5
332
34.9
FBgn0027864
Drosophila melanogaster
1.6e-34
148.3
306
31.7
emh650340
Emiliania huxleyi
1.4e-33
145.2
305
33.8
emh279700
Emiliania huxleyi
1.1e-25
119.0
249
35.7
ccr148440
Chondrus crispus
3.8e-23
110.5
160
43.1
emh36380
Emiliania huxleyi
8.7e-20
99.4
133
44.4
tho590480
Thalassiosira oceanica
1.6e-10
68.6
53
62.3
ps00G155640
Pseudo-nitzschia multiseries
1.7e-07
58.5
144
29.2
CM04G01390
Cyanidioschyzon merolae
5.0e-07
57.0
57
49.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing